RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 GNG8Q9UK08 70 aa13.08□□□□□ -0.32
CUX2-202ENST00000397643 ERGIC3Q9Y282 383 aa13.08□□□□□ -0.32
CUX2-202ENST00000397643 ANKRD30BLA7E2S9 258 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 PRR32B1ATL7 298 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 J3QLW9 94 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 MAGEB4O15481 346 aaPredicted RBP13.07□□□□□ -0.32
CUX2-202ENST00000397643 XRCC2O43543 280 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 MRPS14O60783 128 aaKnown RBP13.07□□□□□ -0.32
CUX2-202ENST00000397643 LIMS3P0CW19 117 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 LIMS4P0CW20 117 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 CD28P10747 220 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 ZNF19P17023 458 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 C21orf33P30042 268 aaPredicted RBP13.07□□□□□ -0.32
CUX2-202ENST00000397643 DDOSTP39656 456 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 CX3CR1P49238 355 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 FAM3AP98173 230 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 AANATQ16613 207 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 ZNF829Q3KNS6 432 aaPredicted RBP13.07□□□□□ -0.32
CUX2-202ENST00000397643 TP53I3Q53FA7 332 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 ZNF684Q5T5D7 378 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 FOXB2Q5VYV0 432 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 RNLSQ5VYX0 342 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 ZNF788Q6ZQV5 615 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 OR4S1Q8NGB4 309 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 PIFOQ8TCI5 191 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 C4orf36Q96KX1 117 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 GAFA1Q96PS6 74 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 ZNF649Q9BS31 505 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 CDCA4Q9BXL8 241 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 DNTTIP1Q9H147 329 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 WDR13Q9H1Z4 485 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 ZNF702PQ9H963 129 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 SERTAD4Q9NUC0 356 aa13.07□□□□□ -0.32
CUX2-202ENST00000397643 hCG_38984A0A1B0GV85 526 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 ACOD1A6NK06 481 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 CDIPTO14735 213 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 MYL12BO14950 172 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 FBXO24O75426 580 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 TNFAIP8O95379 198 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 ANXA2P07355 339 aaKnown RBP13.06□□□□□ -0.32
CUX2-202ENST00000397643 VSIG8P0DPA2 414 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 OR12D2P58182 307 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 PSMA6P60900 246 aaKnown RBP13.06□□□□□ -0.32
CUX2-202ENST00000397643 MRPL28Q13084 256 aaKnown RBP13.06□□□□□ -0.32
CUX2-202ENST00000397643 HABP2Q14520 560 aaPredicted RBP13.06□□□□□ -0.32
CUX2-202ENST00000397643 KCTD21Q4G0X4 260 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 PRSS48Q7RTY5 328 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 OR52N1Q8NH53 320 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 ANGPTL6Q8NI99 470 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 HAVCR2Q8TDQ0 301 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 NPFFR1Q9GZQ6 430 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 FAM234AQ9H0X4 552 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 RAB18Q9NP72 206 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 SNTG1Q9NSN8 517 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 SLC25A10Q9UBX3 287 aaPredicted RBP13.06□□□□□ -0.32
CUX2-202ENST00000397643 CLEC2DQ9UHP7 191 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 SNX5Q9Y5X3 404 aa13.06□□□□□ -0.32
CUX2-202ENST00000397643 TMEM269A0A1B0GVZ9 245 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 K7EIL1 84 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 RPP14O95059 124 aaKnown RBP13.05□□□□□ -0.32
CUX2-202ENST00000397643 MT-ND2P03891 347 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 GBX2P52951 348 aaPredicted RBP13.05□□□□□ -0.32
CUX2-202ENST00000397643 CAV3P56539 151 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 ZNF121P58317 390 aaPredicted RBP13.05□□□□□ -0.32
CUX2-202ENST00000397643 NDUFA11Q86Y39 141 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 Q8N2B8 174 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 NANOGP1Q8N7R0 232 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 R3HDM4Q96D70 268 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 PGAM5Q96HS1 289 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 NR1H4Q96RI1 486 aaPredicted RBP13.05□□□□□ -0.32
CUX2-202ENST00000397643 MND1Q9BWT6 205 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 BRD7Q9NPI1 651 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 ZNF391Q9UJN7 358 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 SF3B6Q9Y3B4 125 aaKnown RBP13.05□□□□□ -0.32
CUX2-202ENST00000397643 N6AMT1Q9Y5N5 214 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 R4GMQ9 66 aa13.05□□□□□ -0.32
CUX2-202ENST00000397643 NKX6-3A6NJ46 265 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 LOC110117498-PIK3R3F6TDL0 507 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 SIGLEC5O15389 551 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 MPIG6BO95866 241 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 BMXP51813 675 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 GMFBP60983 142 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 EMX1Q04741 257 aaPredicted RBP13.04□□□□□ -0.32
CUX2-202ENST00000397643 IRF3Q14653 427 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 ZBTB37Q5TC79 503 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 OR2G6Q5TZ20 316 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 LIAT1Q6ZQX7 453 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 FAM57BQ71RH2 274 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 PRSS45Q7RTY3 260 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 SVOPQ8N4V2 548 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 OR52H1Q8NGJ2 320 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 SGK3Q96BR1 496 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 CITED2Q99967 270 aaPredicted RBP13.04□□□□□ -0.32
CUX2-202ENST00000397643 FGF23Q9GZV9 251 aaPredicted RBP13.04□□□□□ -0.32
CUX2-202ENST00000397643 OR10A2Q9H208 303 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 MOB1AQ9H8S9 216 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 ISG20L2Q9H9L3 353 aaKnown RBP13.04□□□□□ -0.32
CUX2-202ENST00000397643 ELL3Q9HB65 397 aaPredicted RBP13.04□□□□□ -0.32
CUX2-202ENST00000397643 FAM206AQ9NX38 181 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 BABAM2Q9NXR7 383 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms