RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 RAB27BO00194 218 aa17.89■□□□□ 0.45
CPNE1-204ENST00000397443 XRCC3O43542 346 aa17.89■□□□□ 0.45
CPNE1-204ENST00000397443 CD8AP01732 235 aa17.89■□□□□ 0.45
CPNE1-204ENST00000397443 PGA5P0DJD9 388 aa17.89■□□□□ 0.45
CPNE1-204ENST00000397443 SCN1BQ07699 218 aa17.89■□□□□ 0.45
CPNE1-204ENST00000397443 CDH24Q86UP0 819 aa17.89■□□□□ 0.45
CPNE1-204ENST00000397443 FAM58AQ8N1B3 248 aa17.89■□□□□ 0.45
CPNE1-204ENST00000397443 CELF2-AS1Q8N7Q2 184 aa17.89■□□□□ 0.45
CPNE1-204ENST00000397443 SOSTQ9BQB4 213 aa17.89■□□□□ 0.45
CPNE1-204ENST00000397443 CLEC4MQ9H2X3 399 aaPredicted RBP17.89■□□□□ 0.45
CPNE1-204ENST00000397443 ELF5Q9UKW6 265 aaPredicted RBP17.89■□□□□ 0.45
CPNE1-204ENST00000397443 PPP1R3CQ9UQK1 317 aa17.89■□□□□ 0.45
CPNE1-204ENST00000397443 USF3Q68DE3 2245 aa17.89■□□□□ 0.45
CPNE1-204ENST00000397443 CPT2P23786 658 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 BLVRBP30043 206 aaPredicted RBP17.88■□□□□ 0.45
CPNE1-204ENST00000397443 PTH2RP49190 550 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 RBM11P57052 281 aaKnown RBP17.88■□□□□ 0.45
CPNE1-204ENST00000397443 FGF12P61328 243 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 NKAPLQ5M9Q1 402 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 C19orf18Q8NEA5 215 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 OR10R2Q8NGX6 335 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 NRIP2Q9BQI9 281 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 SRRQ9GZT4 340 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 EGLN1Q9GZT9 426 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 CXorf56Q9H5V9 222 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 CACNG2Q9Y698 323 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 DYSFO75923 2080 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 GCN1Q92616 2671 aaKnown RBP17.88■□□□□ 0.45
CPNE1-204ENST00000397443 ZNF205O95201 554 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 PTBP3O95758 552 aaKnown RBP17.88■□□□□ 0.45
CPNE1-204ENST00000397443 ADH4P08319 380 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 DANCRP0C864 163 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 GNB3P16520 340 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 GLRA1P23415 457 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 PPP5CP53041 499 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 OR8H2Q8N162 312 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 OR56B1Q8NGI3 324 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 SDHCQ99643 169 aaPredicted RBP17.88■□□□□ 0.45
CPNE1-204ENST00000397443 DCAF16Q9NXF7 216 aa17.88■□□□□ 0.45
CPNE1-204ENST00000397443 DSCAMO60469 2012 aa17.87■□□□□ 0.45
CPNE1-204ENST00000397443 OR7C1O76099 320 aaPredicted RBP17.87■□□□□ 0.45
CPNE1-204ENST00000397443 CYB5R3P00387 301 aaPredicted RBP17.87■□□□□ 0.45
CPNE1-204ENST00000397443 HLA-DQB1P01920 261 aa17.87■□□□□ 0.45
CPNE1-204ENST00000397443 CD55P08174 381 aa17.87■□□□□ 0.45
CPNE1-204ENST00000397443 TNFRSF1AP19438 455 aa17.87■□□□□ 0.45
CPNE1-204ENST00000397443 FAM209AQ5JX71 171 aa17.87■□□□□ 0.45
CPNE1-204ENST00000397443 FAM201AQ5SY85 155 aa17.87■□□□□ 0.45
CPNE1-204ENST00000397443 ELP2Q6IA86 826 aa17.87■□□□□ 0.45
CPNE1-204ENST00000397443 PYHIN1Q6K0P9 492 aa17.87■□□□□ 0.45
CPNE1-204ENST00000397443 BRICD5Q6PL45 260 aa17.87■□□□□ 0.45
CPNE1-204ENST00000397443 POC1AQ8NBT0 407 aa17.87■□□□□ 0.45
CPNE1-204ENST00000397443 ARHGAP5-AS1Q96IT6 56 aa17.87■□□□□ 0.45
CPNE1-204ENST00000397443 TM2D1Q9BX74 207 aa17.87■□□□□ 0.45
CPNE1-204ENST00000397443 HPXP02790 462 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 EGR1P18146 543 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 GATA4P43694 442 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 ERVK11-1P61568 191 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 TESK1Q15569 626 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 PLAC9Q5JTB6 97 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 C16orf87Q6PH81 154 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 Q8N402 240 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 RAB3CQ96E17 227 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 MRPS24Q96EL2 167 aaKnown RBP17.86■□□□□ 0.45
CPNE1-204ENST00000397443 CACNG6Q9BXT2 260 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 ABCB10Q9NRK6 738 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 OR14J1Q9UGF5 321 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 TMEM235A6NFC5 223 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 TMEM50BP56557 158 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 IKZF1Q13422 519 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 CDNFQ49AH0 187 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 OLFML2AQ68BL7 652 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 SFRP4Q6FHJ7 346 aaPredicted RBP17.86■□□□□ 0.45
CPNE1-204ENST00000397443 C11orf71Q6IPW1 123 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 RAB12Q6IQ22 244 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 C6orf201Q7Z4U5 140 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 Q8IYB0 196 aa17.86■□□□□ 0.45
CPNE1-204ENST00000397443 TACC2O95359 2948 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 SPG11Q96JI7 2443 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 FAM221AA4D161 298 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 HSPB6O14558 160 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 TFF1P04155 84 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 CHRM2P08172 466 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 CD40LGP29965 261 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 MNDAP41218 407 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 NR4A2P43354 598 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 CEBPDP49716 269 aaPredicted RBP17.85■□□□□ 0.45
CPNE1-204ENST00000397443 DGCR2P98153 550 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 PITPNAQ00169 270 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 BAK1Q16611 211 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 PCGF3Q3KNV8 242 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 ATAD3CQ5T2N8 411 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 SIGIRRQ6IA17 410 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 BAIAP2L2Q6UXY1 529 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 Q6ZTK2 550 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 FAM89BQ8N5H3 189 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 GCSAMQ8N6F7 178 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 Q8NFD4 153 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 OR5T2Q8NGG2 359 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 CCL17Q92583 94 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 TRAF4Q9BUZ4 470 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms