RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 HMG20AQ9NP66 347 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 DLL4Q9NR61 685 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 ARFGEF3Q5TH69 2177 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 TPPPO94811 219 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 EIF4EP06730 217 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 PRKACAP17612 351 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 ELK1P19419 428 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 NPBWR2P48146 333 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 RBM11P57052 281 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 IL13RA2Q14627 380 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 SPIN3Q5JUX0 258 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 METAP1DQ6UB28 335 aaPredicted RBP19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 CMTM4Q8IZR5 234 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 C15orf40Q8WUR7 153 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 MARVELD3Q96A59 401 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 Q96M66 194 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 LPAR5Q9H1C0 372 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 BANF2Q9H503 90 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 HES4Q9HCC6 221 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 RBFOX1Q9NWB1 397 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 EXTL2Q9UBQ6 330 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 GLS2Q9UI32 602 aa19.88■□□□□ 0.77
TSPAN4-202ENST00000397396 COL8A1P27658 744 aa19.87■□□□□ 0.77
TSPAN4-202ENST00000397396 TNFSF8P32971 234 aa19.87■□□□□ 0.77
TSPAN4-202ENST00000397396 ETV6P41212 452 aa19.87■□□□□ 0.77
TSPAN4-202ENST00000397396 NR4A2P43354 598 aa19.87■□□□□ 0.77
TSPAN4-202ENST00000397396 LSAMPQ13449 338 aa19.87■□□□□ 0.77
TSPAN4-202ENST00000397396 ARL6IP1Q15041 203 aa19.87■□□□□ 0.77
TSPAN4-202ENST00000397396 MPV17LQ2QL34 196 aa19.87■□□□□ 0.77
TSPAN4-202ENST00000397396 HFEQ30201 348 aa19.87■□□□□ 0.77
TSPAN4-202ENST00000397396 RDH5Q92781 318 aa19.87■□□□□ 0.77
TSPAN4-202ENST00000397396 ST3GAL6Q9Y274 331 aa19.87■□□□□ 0.77
TSPAN4-202ENST00000397396 A0A1W2PP11 408 aa19.86■□□□□ 0.77
TSPAN4-202ENST00000397396 OVOL3O00110 214 aa19.86■□□□□ 0.77
TSPAN4-202ENST00000397396 HPXP02790 462 aa19.86■□□□□ 0.77
TSPAN4-202ENST00000397396 PTBP1P26599 531 aaKnown RBP eCLIP19.86■□□□□ 0.77
TSPAN4-202ENST00000397396 PITPNBP48739 271 aa19.86■□□□□ 0.77
TSPAN4-202ENST00000397396 EFNB2P52799 333 aa19.86■□□□□ 0.77
TSPAN4-202ENST00000397396 SPRNQ5BIV9 151 aa19.86■□□□□ 0.77
TSPAN4-202ENST00000397396 CNIH2Q6PI25 160 aa19.86■□□□□ 0.77
TSPAN4-202ENST00000397396 CCDC190Q86UF4 302 aa19.86■□□□□ 0.77
TSPAN4-202ENST00000397396 ZNF488Q96MN9 340 aa19.86■□□□□ 0.77
TSPAN4-202ENST00000397396 COL12A1Q99715 3063 aa19.86■□□□□ 0.77
TSPAN4-202ENST00000397396 KNG1P01042 644 aa19.85■□□□□ 0.77
TSPAN4-202ENST00000397396 LHBP01229 141 aa19.85■□□□□ 0.77
TSPAN4-202ENST00000397396 PMELP40967 661 aa19.85■□□□□ 0.77
TSPAN4-202ENST00000397396 ZNF45Q02386 682 aa19.85■□□□□ 0.77
TSPAN4-202ENST00000397396 ACP7Q6ZNF0 438 aa19.85■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM89BQ8N5H3 189 aa19.85■□□□□ 0.77
TSPAN4-202ENST00000397396 GCSAMQ8N6F7 178 aa19.85■□□□□ 0.77
TSPAN4-202ENST00000397396 IGFBPL1Q8WX77 278 aa19.85■□□□□ 0.77
TSPAN4-202ENST00000397396 WDR12Q9GZL7 423 aaKnown RBP19.85■□□□□ 0.77
TSPAN4-202ENST00000397396 SPACA1Q9HBV2 294 aa19.85■□□□□ 0.77
TSPAN4-202ENST00000397396 TMEM106BQ9NUM4 274 aa19.85■□□□□ 0.77
TSPAN4-202ENST00000397396 DNAJB11Q9UBS4 358 aa19.85■□□□□ 0.77
TSPAN4-202ENST00000397396 PLEKHA6Q9Y2H5 1048 aa19.85■□□□□ 0.77
TSPAN4-202ENST00000397396 USP9YO00507 2555 aaPredicted RBP19.84■□□□□ 0.77
TSPAN4-202ENST00000397396 XRCC3O43542 346 aa19.84■□□□□ 0.77
TSPAN4-202ENST00000397396 EFNA4P52798 201 aa19.84■□□□□ 0.77
TSPAN4-202ENST00000397396 PLA2G7Q13093 441 aa19.84■□□□□ 0.77
TSPAN4-202ENST00000397396 ZNF146Q15072 292 aa19.84■□□□□ 0.77
TSPAN4-202ENST00000397396 TMEM69Q5SWH9 247 aa19.84■□□□□ 0.77
TSPAN4-202ENST00000397396 CCL17Q92583 94 aa19.84■□□□□ 0.77
TSPAN4-202ENST00000397396 GAL3ST1Q99999 423 aa19.84■□□□□ 0.77
TSPAN4-202ENST00000397396 SEBOXQ9HB31 216 aaPredicted RBP19.84■□□□□ 0.77
TSPAN4-202ENST00000397396 MYOZ1Q9NP98 299 aaPredicted RBP19.84■□□□□ 0.77
TSPAN4-202ENST00000397396 FABP12A6NFH5 140 aa19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 TMEM178BH3BS89 294 aa19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 CDK2P24941 298 aa19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 CDKN1AP38936 164 aa19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 MNDAP41218 407 aa19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 VEGFCP49767 419 aa19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 PITPNAQ00169 270 aa19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 MICBQ29980 383 aa19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 PIGYQ3MUY2 71 aa19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 ZNF787Q6DD87 383 aa19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 OR4M1Q8NGD0 313 aa19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 OR10R2Q8NGX6 335 aa19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 BARX1Q9HBU1 254 aaPredicted RBP19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 NLKQ9UBE8 527 aa19.83■□□□□ 0.77
TSPAN4-202ENST00000397396 DOPEY2Q9Y3R5 2298 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 CLDN25C9JDP6 229 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 F8VVB4 439 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 F8VWA3 439 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 CYB5R3P00387 301 aaPredicted RBP19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 F12P00748 615 aaPredicted RBP19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 MUC1P15941 1255 aaPredicted RBP19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 GABRR1P24046 479 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 KCNJ8Q15842 424 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 TAF9Q16594 264 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 PYHIN1Q6K0P9 492 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 FAM131AQ6UXB0 335 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 PEG10Q86TG7 708 aaKnown RBP19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 BATF2Q8N1L9 274 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 NEDD4LQ96PU5 975 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 IFT22Q9H7X7 185 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 AKIP1Q9NQ31 210 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 CACNA1DQ01668 2161 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 DSCAMO60469 2012 aa19.82■□□□□ 0.76
TSPAN4-202ENST00000397396 TRAV38-1A0A0B4J264 116 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms