RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 DNAJB9Q9UBS3 223 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 TAGLN3Q9UI15 199 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.03□□□□□ -1.28
CAPN3-208ENST00000397204 PIGLQ9Y2B2 252 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 KLHDC2Q9Y2U9 406 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 TMEM14AQ9Y6G1 99 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 MINOS1-NBL1R4GNA1 71 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 TCRBV5S2A0A599 114 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 PQLC2LA1A4F0 135 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 ARRDC5A6NEK1 342 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 K7EIL1 84 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 DHRS3O75911 302 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 IGHV1-8P0DP01 117 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 JUNBP17275 347 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-208ENST00000397204 ATP6V1B2P21281 511 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 MPZP25189 248 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 HCCSP53701 268 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 ERVK11-1P61568 191 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 RPS7P62081 194 aaKnown RBP7.02□□□□□ -1.29
CAPN3-208ENST00000397204 SLC35A2P78381 396 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 CDK5Q00535 292 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 DYNC1I2Q13409 638 aaKnown RBP7.02□□□□□ -1.29
CAPN3-208ENST00000397204 LDLRAD2Q5SZI1 272 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 TMEM42Q69YG0 159 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 C16orf82Q7Z2V1 217 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 COMMD2Q86X83 199 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 DHFR2Q86XF0 187 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 ARHGAP24Q8N264 748 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 AKR1E2Q96JD6 320 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 TEX12Q9BXU0 123 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 MUC13Q9H3R2 512 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 SEBOXQ9HB31 216 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-208ENST00000397204 MED4Q9NPJ6 270 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 ARL8BQ9NVJ2 186 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 ZNF446Q9NWS9 450 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 OR14J1Q9UGF5 321 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 NUFIP1Q9UHK0 495 aaKnown RBP7.02□□□□□ -1.29
CAPN3-208ENST00000397204 SLC22A13Q9Y226 551 aa7.02□□□□□ -1.29
CAPN3-208ENST00000397204 TSSC4Q9Y5U2 329 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-208ENST00000397204 A0A1W2PRX2 142 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 TCRBV4S1A1TA0A5B7 111 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 hADV38S2A0JD32 116 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 DHRS7CA6NNS2 312 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 HTR3BO95264 441 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 RAP2AP10114 183 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 PF4V1P10720 104 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 PIPP12273 146 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-208ENST00000397204 OSMP13725 252 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 SLC2A5P22732 501 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 CEBPDP49716 269 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-208ENST00000397204 RIDAP52758 137 aaKnown RBP7.01□□□□□ -1.29
CAPN3-208ENST00000397204 ACTR3P61158 418 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 COL10A1Q03692 680 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 SLC34A1Q06495 639 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 IL24Q13007 206 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 TRIM25Q14258 630 aaKnown RBP7.01□□□□□ -1.29
CAPN3-208ENST00000397204 ZNF829Q3KNS6 432 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-208ENST00000397204 ZBTB49Q6ZSB9 765 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 Q6ZSR3 168 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 ASRGL1Q7L266 308 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 GDPD3Q7L5L3 318 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 ASCC1Q8N9N2 400 aaKnown RBP7.01□□□□□ -1.29
CAPN3-208ENST00000397204 SNX22Q96L94 193 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 ZNF714Q96N38 554 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 PKIBQ9C010 78 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 ZNF556Q9HAH1 456 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 HILPDAQ9Y5L2 63 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 STAB2Q8WWQ8 2551 aa7.01□□□□□ -1.29
CAPN3-208ENST00000397204 PSMD9O00233 223 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 ZNF737O75373 536 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 CLIC3O95833 236 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 CST1P01037 141 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 TTRP02766 147 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 HOXB6P17509 224 aaKnown RBP7□□□□□ -1.29
CAPN3-208ENST00000397204 HTR1DP28221 377 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 BRS3P32247 399 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 EDDM3BP56851 147 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 ESRRGP62508 458 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 ACTA2P62736 377 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 ACTG2P63267 376 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 ACTC1P68032 377 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 ACTA1P68133 377 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 EGFEM1PQ0D2K5 195 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 IL18R1Q13478 541 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 APOFQ13790 326 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 TCTEX1D4Q5JR98 221 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 SLX4IPQ5VYV7 408 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 CCDC121Q6ZUS5 278 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 ANGPTL5Q86XS5 388 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 ELMOD2Q8IZ81 293 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 OR8H2Q8N162 312 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 BBS1Q8NFJ9 593 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 NDNFQ8TB73 568 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 CAPSLQ8WWF8 208 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 STMN2Q93045 179 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 Q96M66 194 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 WWC2-AS2Q96NR7 200 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 CHID1Q9BWS9 393 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 GPR61Q9BZJ8 451 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 INPP5EQ9NRR6 644 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms