RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 PAX2Q02962 417 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 PAX8Q06710 450 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 FAM76BQ5HYJ3 339 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 BCL2L15Q5TBC7 163 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 TEX36Q5VZQ5 186 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 CD276Q5ZPR3 534 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 PRSS35Q8N3Z0 413 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 OR10Z1Q8NGY1 313 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 LRRC29Q8WV35 223 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 RNF170Q96K19 258 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 CMTM3Q96MX0 182 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 COMMD4Q9H0A8 199 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 GPR84Q9NQS5 396 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 OR52A1Q9UKL2 312 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 GTF2A1LQ9UNN4 478 aa12.14□□□□□ -0.47
SEC13-208ENST00000397109 IGHV2-70DA0A0C4DH43 119 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 PDCD5O14737 125 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 TNFRSF13BO14836 293 aaPredicted RBP12.13□□□□□ -0.47
SEC13-208ENST00000397109 ADAM20O43506 726 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 DHRS3O75911 302 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 FSHBP01225 129 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 PPIAL4GP0DN37 164 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 PSMD7P51665 324 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 RPS11P62280 158 aaKnown RBP eCLIP12.13□□□□□ -0.47
SEC13-208ENST00000397109 MICBQ29980 383 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 KRTAP24-1Q3LI83 254 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 WDR38Q5JTN6 314 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 WDR82Q6UXN9 313 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 ZNF841Q6ZN19 808 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 Q6ZSR3 168 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 OR5AK2Q8NH90 309 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 FAM71F1Q96KD3 344 aaPredicted RBP12.13□□□□□ -0.47
SEC13-208ENST00000397109 PPP1R3EQ9H7J1 279 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 FRRS1LQ9P0K9 344 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 RABL2AQ9UBK7 228 aaPredicted RBP12.13□□□□□ -0.47
SEC13-208ENST00000397109 RABL2BQ9UNT1 228 aa12.13□□□□□ -0.47
SEC13-208ENST00000397109 KIR2DS1A0A191URI9 304 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 OR4C45A6NMZ5 311 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 CDIPTO14735 213 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 GYPAP02724 150 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 ISG15P05161 165 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 CLEC2LP0C7M8 214 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 RAB3BP20337 219 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 CCL1P22362 96 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 KIR3DL2P43630 455 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 GNG3P63215 75 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 C11orf91Q3C1V1 193 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 CEACAM21Q3KPI0 293 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 Q499Y3 187 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 FAM90A1Q86YD7 464 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 BPIFB2Q8N4F0 458 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 GDPD1Q8N9F7 314 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 OR5A2Q8NGI9 324 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 HPSE2Q8WWQ2 592 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 PPP1R14AQ96A00 147 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 PPP1R14BQ96C90 147 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 TECTBQ96PL2 329 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 JMJD8Q96S16 334 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 NUDT16L1Q9BRJ7 211 aaKnown RBP12.12□□□□□ -0.47
SEC13-208ENST00000397109 SUCNR1Q9BXA5 334 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 ABRACLQ9P1F3 81 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 KAAG1Q9UBP8 84 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 PIGLQ9Y2B2 252 aa12.12□□□□□ -0.47
SEC13-208ENST00000397109 STAB1Q9NY15 2570 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 OR5B21A6NL26 309 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 DHRS7CA6NNS2 312 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 NOTOA8MTQ0 251 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 SRRM5B3KS81 715 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 ENSAO43768 121 aaKnown RBP12.11□□□□□ -0.47
SEC13-208ENST00000397109 ZFPL1O95159 310 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 LIPFP07098 398 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 UBCP0CG48 685 aaKnown RBP12.11□□□□□ -0.47
SEC13-208ENST00000397109 EGR1P18146 543 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 SRMP19623 302 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 DEFA1P59665 94 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 DEFA3P59666 94 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 HOXA4Q00056 320 aaPredicted RBP12.11□□□□□ -0.47
SEC13-208ENST00000397109 OXA1LQ15070 435 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 HSD17B12Q53GQ0 312 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 SCCPDHQ8NBX0 429 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 CCDC54Q8NEL0 328 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 SETD6Q8TBK2 473 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 DACT3Q96B18 629 aaPredicted RBP12.11□□□□□ -0.47
SEC13-208ENST00000397109 SLITRK2Q9H156 845 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 CTSZQ9UBR2 303 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 NUP50Q9UKX7 468 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 SLC22A13Q9Y226 551 aa12.11□□□□□ -0.47
SEC13-208ENST00000397109 TRBV5-5A0A0J9YX44 114 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 A0A1B0GTI1 187 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 SHISA3A0PJX4 238 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 FABP12A6NFH5 140 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 NRASP01111 189 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 FAHP16930 419 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 GPM6AP51674 278 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 CLVS2Q5SYC1 327 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 TMEM244Q5VVB8 128 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 MOB3CQ70IA8 216 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 DOK3Q7L591 496 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 SLC36A1Q7Z2H8 476 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 LYSMD2Q8IV50 215 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms