RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 OR2T2Q6IF00 324 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 UTS2BQ765I0 119 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 OR13C9Q8NGT0 318 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 FOXRED1Q96CU9 486 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-202ENST00000396828 HAVCR1Q96D42 359 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 CPNE2Q96FN4 548 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-202ENST00000396828 TECTBQ96PL2 329 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 CHST5Q9GZS9 411 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 TMEM138Q9NPI0 162 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 IL19Q9UHD0 177 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 PPP1R3CQ9UQK1 317 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 AK6Q9Y3D8 172 aaKnown RBP8.62□□□□□ -1.03
NEDD8-202ENST00000396828 V9GY05 133 aa8.62□□□□□ -1.03
NEDD8-202ENST00000396828 NOTCH1P46531 2555 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 SHISA3A0PJX4 238 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 CD300LBA8K4G0 201 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 NOTOA8MTQ0 251 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 A8MXK9 166 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 MLNRO43193 412 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 ALX3O95076 343 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 CST4P01036 141 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 NRASP01111 189 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 HCKP08631 526 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 TNFRSF1AP19438 455 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 ACKR3P25106 362 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 BAMBIQ13145 260 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 SLC9A3R2Q15599 337 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 ZNF404Q494X3 552 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 LRRTM1Q86UE6 522 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 SPICQ8N5J4 248 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 OR56B2PQ8NGI1 322 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 MCFD2Q8NI22 146 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 PIGCQ92535 297 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 DACT3Q96B18 629 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-202ENST00000396828 HIST1H2AAQ96QV6 131 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 PLGRKTQ9HBL7 147 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 TMEM165Q9HC07 324 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 ABCB9Q9NP78 766 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 SLC7A11Q9UPY5 501 aa8.61□□□□□ -1.03
NEDD8-202ENST00000396828 DOCK11Q5JSL3 2073 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 SMIM30A4D0T7 59 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 ZNF850A8MQ14 1090 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 F5H5P2 479 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 GMDSO60547 372 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 ALDOBP05062 364 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 CLEC2LP0C7M8 214 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 ATF1P18846 271 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 PRKACBP22694 351 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 MDH2P40926 338 aaKnown RBP8.6□□□□□ -1.03
NEDD8-202ENST00000396828 OR10A3P58181 314 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 SRSF4Q08170 494 aaKnown RBP8.6□□□□□ -1.03
NEDD8-202ENST00000396828 FOXL1Q12952 345 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 IDNKQ5T6J7 187 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 DDI2Q5TDH0 399 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 PLCXD3Q63HM9 321 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 TMEM42Q69YG0 159 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 ZNF529Q6P280 563 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 SFXN4Q6P4A7 337 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 MZT2AQ6P582 158 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 LYPD2Q6UXB3 125 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 RBMS3Q6XE24 437 aaKnown RBP8.6□□□□□ -1.03
NEDD8-202ENST00000396828 MOB3CQ70IA8 216 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 CDH26Q8IXH8 852 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 ZDHHC23Q8IYP9 409 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 PNLDC1Q8NA58 520 aaKnown RBP8.6□□□□□ -1.03
NEDD8-202ENST00000396828 BHLHE23Q8NDY6 225 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 C19orf18Q8NEA5 215 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 ACOT12Q8WYK0 555 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 SPSB1Q96BD6 273 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 MEGF10Q96KG7 1140 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 TMEM246Q9BRR3 403 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 MRI1Q9BV20 369 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 PAPOLGQ9BWT3 736 aaKnown RBP8.6□□□□□ -1.03
NEDD8-202ENST00000396828 SLC22A4Q9H015 551 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 MMP27Q9H306 513 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 UNKLQ9H9P5 680 aaKnown RBP8.6□□□□□ -1.03
NEDD8-202ENST00000396828 GPR173Q9NS66 373 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 MRPL15Q9P015 296 aaKnown RBP8.6□□□□□ -1.03
NEDD8-202ENST00000396828 DAPK2Q9UIK4 370 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 NOP16Q9Y3C1 178 aaKnown RBP8.6□□□□□ -1.03
NEDD8-202ENST00000396828 RHBDD3Q9Y3P4 386 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 MPC1Q9Y5U8 109 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 A3GALT2U3KPV4 340 aa8.6□□□□□ -1.03
NEDD8-202ENST00000396828 IFITM5A6NNB3 132 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 IQCF6A8MYZ5 107 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 AIPO00170 330 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 RNASE1P07998 156 aaKnown RBP8.59□□□□□ -1.03
NEDD8-202ENST00000396828 MDKP21741 143 aaPredicted RBP8.59□□□□□ -1.03
NEDD8-202ENST00000396828 TNFSF4P23510 183 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 OMGP23515 440 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 AZGP1P25311 298 aaKnown RBP8.59□□□□□ -1.03
NEDD8-202ENST00000396828 S100A5P33763 92 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 ZNF93P35789 620 aaPredicted RBP8.59□□□□□ -1.03
NEDD8-202ENST00000396828 CAPZA1P52907 286 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 CAV3P56539 151 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 PRDX4Q13162 271 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 UBE2V2Q15819 145 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 ESCO2Q56NI9 601 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 ASPHD2Q6ICH7 369 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 SHISA2Q6UWI4 295 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms