RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 SYNGR4O95473 234 aa14.31□□□□□ -0.12
TRIM39-205ENST00000396551 AIMP2Q13155 320 aaKnown RBP14.31□□□□□ -0.12
TRIM39-205ENST00000396551 IL15RAQ13261 267 aa14.31□□□□□ -0.12
TRIM39-205ENST00000396551 HES3Q5TGS1 186 aa14.31□□□□□ -0.12
TRIM39-205ENST00000396551 POC1AQ8NBT0 407 aa14.31□□□□□ -0.12
TRIM39-205ENST00000396551 PRRG4Q9BZD6 226 aa14.31□□□□□ -0.12
TRIM39-205ENST00000396551 COQ3Q9NZJ6 369 aa14.31□□□□□ -0.12
TRIM39-205ENST00000396551 ATPIF1Q9UII2 106 aa14.31□□□□□ -0.12
TRIM39-205ENST00000396551 TEX13DA0A0J9YY54 714 aaPredicted RBP14.3□□□□□ -0.12
TRIM39-205ENST00000396551 FAM221AA4D161 298 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 MSGN1A6NI15 193 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 TNFSF15O95150 251 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 LYL1P12980 280 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 DTYMKP23919 212 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 PLGLB1Q02325 96 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 Q6ZPA2 131 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 EIF4E3Q8N5X7 224 aaKnown RBP14.3□□□□□ -0.12
TRIM39-205ENST00000396551 OR51F2Q8NH61 342 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 FAM117AQ9C073 453 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 FGF23Q9GZV9 251 aaPredicted RBP14.3□□□□□ -0.12
TRIM39-205ENST00000396551 METTL8Q9H825 291 aaKnown RBP14.3□□□□□ -0.12
TRIM39-205ENST00000396551 BCO1Q9HAY6 547 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 PARPBPQ9NWS1 579 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 ST3GAL6Q9Y274 331 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 SESN1Q9Y6P5 492 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 HOXB5P09067 269 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 OR5H8P0DN80 308 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 M6PRP20645 277 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 NUP62P37198 522 aaPredicted RBP14.3□□□□□ -0.12
TRIM39-205ENST00000396551 BATF2Q8N1L9 274 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 PHYHIPLQ96FC7 376 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 PIK3IP1Q96FE7 263 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 F8VVB4 439 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 F8VWA3 439 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 CTSDP07339 412 aaPredicted RBP14.3□□□□□ -0.12
TRIM39-205ENST00000396551 MEOX1P50221 254 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 GALNT11Q8NCW6 608 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 C2orf50Q96LR7 162 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 ACKR4Q9NPB9 350 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 LIPGQ9Y5X9 500 aa14.3□□□□□ -0.12
TRIM39-205ENST00000396551 SP1P08047 785 aa14.29□□□□□ -0.12
TRIM39-205ENST00000396551 CCNOP22674 350 aa14.29□□□□□ -0.12
TRIM39-205ENST00000396551 NPBWR2P48146 333 aa14.29□□□□□ -0.12
TRIM39-205ENST00000396551 RAB32Q13637 225 aa14.29□□□□□ -0.12
TRIM39-205ENST00000396551 PRSS54Q6PEW0 395 aa14.29□□□□□ -0.12
TRIM39-205ENST00000396551 STPG2Q8N412 459 aa14.29□□□□□ -0.12
TRIM39-205ENST00000396551 MDS2Q8NDY4 140 aa14.29□□□□□ -0.12
TRIM39-205ENST00000396551 OR56B2PQ8NGI1 322 aa14.29□□□□□ -0.12
TRIM39-205ENST00000396551 CYTL1Q9NRR1 136 aa14.29□□□□□ -0.12
TRIM39-205ENST00000396551 IFNA2P01563 188 aa14.29□□□□□ -0.12
TRIM39-205ENST00000396551 ECI1P42126 302 aa14.29□□□□□ -0.12
TRIM39-205ENST00000396551 SNTB1Q13884 538 aaKnown RBP14.29□□□□□ -0.12
TRIM39-205ENST00000396551 ATP1A1-AS1Q5TC04 95 aa14.29□□□□□ -0.12
TRIM39-205ENST00000396551 NUFIP2Q7Z417 695 aaKnown RBP14.29□□□□□ -0.12
TRIM39-205ENST00000396551 ZNF611Q8N823 705 aa14.29□□□□□ -0.12
TRIM39-205ENST00000396551 MRPS24Q96EL2 167 aaKnown RBP14.29□□□□□ -0.12
TRIM39-205ENST00000396551 REPIN1Q9BWE0 567 aaKnown RBP14.29□□□□□ -0.12
TRIM39-205ENST00000396551 NME2P1O60361 137 aa14.28□□□□□ -0.12
TRIM39-205ENST00000396551 NME2P22392 152 aa14.28□□□□□ -0.12
TRIM39-205ENST00000396551 RBM11P57052 281 aaKnown RBP14.28□□□□□ -0.12
TRIM39-205ENST00000396551 PPIAP62937 165 aaKnown RBP14.28□□□□□ -0.12
TRIM39-205ENST00000396551 RBM39Q14498 530 aaKnown RBP14.28□□□□□ -0.12
TRIM39-205ENST00000396551 TECTBQ96PL2 329 aa14.28□□□□□ -0.12
TRIM39-205ENST00000396551 NECAP2Q9NVZ3 263 aa14.28□□□□□ -0.12
TRIM39-205ENST00000396551 C5orf49A4QMS7 147 aa14.28□□□□□ -0.12
TRIM39-205ENST00000396551 CRYM-AS1A6NIL9 109 aa14.28□□□□□ -0.12
TRIM39-205ENST00000396551 ZNF724A8MTY0 619 aa14.28□□□□□ -0.12
TRIM39-205ENST00000396551 PAN3Q58A45 887 aaKnown RBP14.28□□□□□ -0.12
TRIM39-205ENST00000396551 DHRS11Q6UWP2 260 aa14.28□□□□□ -0.12
TRIM39-205ENST00000396551 TNRC6AQ8NDV7 1962 aaKnown RBP14.28□□□□□ -0.12
TRIM39-205ENST00000396551 B8ZZF3 427 aa14.28□□□□□ -0.12
TRIM39-205ENST00000396551 SLC25A26Q70HW3 274 aa14.28□□□□□ -0.12
TRIM39-205ENST00000396551 STOML3Q8TAV4 291 aa14.28□□□□□ -0.12
TRIM39-205ENST00000396551 RNF122Q9H9V4 155 aa14.28□□□□□ -0.12
TRIM39-205ENST00000396551 KRBOX1C9JBD0 128 aa14.27□□□□□ -0.12
TRIM39-205ENST00000396551 PDCD6O75340 191 aa14.27□□□□□ -0.12
TRIM39-205ENST00000396551 SLC22A25Q6T423 547 aa14.27□□□□□ -0.12
TRIM39-205ENST00000396551 GLRX5Q86SX6 157 aa14.27□□□□□ -0.12
TRIM39-205ENST00000396551 APH1AQ96BI3 265 aa14.27□□□□□ -0.12
TRIM39-205ENST00000396551 PQLC2LA1A4F0 135 aa14.27□□□□□ -0.13
TRIM39-205ENST00000396551 HOXD4P09016 255 aaPredicted RBP14.27□□□□□ -0.13
TRIM39-205ENST00000396551 HPSE2Q8WWQ2 592 aa14.27□□□□□ -0.13
TRIM39-205ENST00000396551 C1orf123Q9NWV4 160 aa14.27□□□□□ -0.13
TRIM39-205ENST00000396551 GSKIPQ9P0R6 139 aa14.27□□□□□ -0.13
TRIM39-205ENST00000396551 RBMXP38159 391 aaKnown RBP14.26□□□□□ -0.13
TRIM39-205ENST00000396551 PRDX4Q13162 271 aa14.26□□□□□ -0.13
TRIM39-205ENST00000396551 ELP2Q6IA86 826 aa14.26□□□□□ -0.13
TRIM39-205ENST00000396551 SGPP2Q8IWX5 399 aa14.26□□□□□ -0.13
TRIM39-205ENST00000396551 TOMM40LQ969M1 308 aa14.26□□□□□ -0.13
TRIM39-205ENST00000396551 PAPOLGQ9BWT3 736 aaKnown RBP14.26□□□□□ -0.13
TRIM39-205ENST00000396551 SHARPINQ9H0F6 387 aa14.26□□□□□ -0.13
TRIM39-205ENST00000396551 ZNF629Q9UEG4 869 aaPredicted RBP14.26□□□□□ -0.13
TRIM39-205ENST00000396551 KLF13Q9Y2Y9 288 aaPredicted RBP14.26□□□□□ -0.13
TRIM39-205ENST00000396551 SS18L1O75177 396 aaPredicted RBP14.26□□□□□ -0.13
TRIM39-205ENST00000396551 NGFP01138 241 aa14.26□□□□□ -0.13
TRIM39-205ENST00000396551 COX5BP10606 129 aa14.26□□□□□ -0.13
TRIM39-205ENST00000396551 CD79AP11912 226 aa14.26□□□□□ -0.13
TRIM39-205ENST00000396551 MS4A7Q9GZW8 240 aaPredicted RBP14.26□□□□□ -0.13
TRIM39-205ENST00000396551 PCNX2A6NKB5 2137 aa14.26□□□□□ -0.13
TRIM39-205ENST00000396551 PLEKHN1Q494U1 663 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms