RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 MS4A7Q9GZW8 240 aaPredicted RBP6.66□□□□□ -1.34
SYNE2-205ENST00000394768 RREB1Q92766 1687 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 CBY3A6NI87 242 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 SLC25A1P53007 311 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 LYZP61626 148 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 UBE2L3P68036 154 aaKnown RBP6.66□□□□□ -1.34
SYNE2-205ENST00000394768 SKP2Q13309 424 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 OR1N2Q8NGR9 330 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 ELOVL1Q9BW60 279 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 ZFP64Q9NPA5 681 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 RCL1Q9Y2P8 373 aaKnown RBP6.66□□□□□ -1.34
SYNE2-205ENST00000394768 CHD5Q8TDI0 1954 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 OR3A4PP47883 348 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 HYAL4Q2M3T9 481 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 STAC2Q6ZMT1 411 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 DPH3Q96FX2 82 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 TIMP4Q99727 224 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 TEX101Q9BY14 249 aa6.66□□□□□ -1.34
SYNE2-205ENST00000394768 MFNGO00587 321 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 SLC2A10O95528 541 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 GPANK1O95872 356 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 CDC34P49427 236 aaPredicted RBP6.65□□□□□ -1.34
SYNE2-205ENST00000394768 ZNF252P-AS1Q0IIN9 211 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 TCTN3Q6NUS6 607 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 OR2D2Q9H210 308 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 PARD6AQ9NPB6 346 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 SLC22A13Q9Y226 551 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 VSIG4Q9Y279 399 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 TMPRSS2O15393 492 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 CST4P01036 141 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 GABRG2P18507 467 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 CD40P25942 277 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 PTGER1P34995 402 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 NUTF2P61970 127 aaKnown RBP6.65□□□□□ -1.34
SYNE2-205ENST00000394768 UBTD1Q9HAC8 227 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 IGHV3-20A0A0C4DH32 117 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 FITM1A5D6W6 292 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 OPN1MWP04001 364 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 PDGFAP04085 211 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 MELTFP08582 738 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 OPN1MW2P0DN77 364 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 OPN1MW3P0DN78 364 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 TSPOP30536 169 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 TMEM241Q24JQ0 296 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 RAB24Q969Q5 203 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 MOGAT1Q96PD6 335 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 SF3B5Q9BWJ5 86 aaKnown RBP6.65□□□□□ -1.34
SYNE2-205ENST00000394768 NRSN2Q9GZP1 204 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 MMP26Q9NRE1 261 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 CLN8Q9UBY8 286 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 B4DEV8 164 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 PMCHP20382 165 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 GZMHP20718 246 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 TMPRSS3P57727 454 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 METTL26Q96S19 204 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 CEP290O15078 2479 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 A0A1W2PNR3 127 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 METTL12A8MUP2 240 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 ONECUT2O95948 504 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 CDK5R1Q15078 307 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 RHOUQ7L0Q8 258 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 LRP10Q7Z4F1 713 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 PRR7Q8TB68 274 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 NIPSNAP1Q9BPW8 284 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 CDC42EP3Q9UKI2 254 aa6.65□□□□□ -1.34
SYNE2-205ENST00000394768 SPTY2D1-AS1A0A0U1RR47 76 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 ADAM20O43506 726 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 MPDU1O75352 247 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 FAM106CPP0CH98 169 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 HLA-GP17693 338 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 FCN2Q15485 313 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 TNXAQ16473 311 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 ZNF528Q3MIS6 628 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 SAMD13Q5VXD3 122 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 OR5M9Q8NGP3 310 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 PHYHIPLQ96FC7 376 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 SGK494Q96LW2 274 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 PKD1L3Q7Z443 1732 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 SIX6O95475 246 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 JUNBP17275 347 aaPredicted RBP6.65□□□□□ -1.35
SYNE2-205ENST00000394768 ERVFRD-1P60508 538 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 COX20Q5RI15 118 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 OTOSQ8NHW6 89 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 RXFP4Q8TDU9 374 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 ISL2Q96A47 359 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 C4orf45Q96LM5 186 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 HINT3Q9NQE9 182 aaKnown RBP6.65□□□□□ -1.35
SYNE2-205ENST00000394768 TMPRSS11DO60235 418 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 BTF3P20290 206 aaKnown RBP6.65□□□□□ -1.35
SYNE2-205ENST00000394768 IL13RA2Q14627 380 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 ETV3LQ6ZN32 361 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 OR52I2Q8NH67 350 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 NUDT8Q8WV74 236 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 TMEM38BQ9NVV0 291 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 CLEC5AQ9NY25 188 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 ZDBF2Q9HCK1 2354 aa6.65□□□□□ -1.35
SYNE2-205ENST00000394768 SLC17A2O00624 439 aa6.64□□□□□ -1.35
SYNE2-205ENST00000394768 FGF17O60258 216 aa6.64□□□□□ -1.35
SYNE2-205ENST00000394768 OR2A4O95047 310 aa6.64□□□□□ -1.35
SYNE2-205ENST00000394768 SLC6A1P30531 599 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms