RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SPRY1O43609 319 aaPredicted RBP15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 ACKR3P25106 362 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 PPT1P50897 306 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 MTCP1P56278 107 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 TMEM187Q14656 261 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 TAF9Q16594 264 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 C15orf54Q8N8G6 183 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 TOMM40LQ969M1 308 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 FBXO17Q96EF6 278 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 SCRT1Q9BWW7 348 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 AKIRIN1Q9H9L7 192 aaPredicted RBP15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 WFDC1Q9HC57 220 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 COL27A1Q8IZC6 1860 aaPredicted RBP15.96■□□□□ 0.14
PCDHA1-202ENST00000394633 NTN3O00634 580 aaPredicted RBP15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 OR5AC1P0C628 307 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 SNCAP37840 140 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 CHAF1BQ13112 559 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 OR2AE1Q8NHA4 323 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 METTL9Q9H1A3 318 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 NAA60Q9H7X0 242 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 OCIAD1Q9NX40 245 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 ZNF292O60281 2723 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 IGKV1-27A0A075B6S5 117 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 E5RGE8 158 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 MASP2O00187 686 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 NME2P1O60361 137 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 EIF3GO75821 320 aaKnown RBP eCLIP15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 TSPAN15O95858 294 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 CELA2AP08217 269 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 MIDNQ504T8 468 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 CCDC54Q8NEL0 328 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 HIST1H2BAQ96A08 127 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 ZNF837Q96EG3 531 aaPredicted RBP15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 FAM212BQ9NTI7 297 aaPredicted RBP15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 NECAP2Q9NVZ3 263 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 C19orf25Q9UFG5 118 aaPredicted RBP15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 NSG2Q9Y328 171 aa15.95■□□□□ 0.14
PCDHA1-202ENST00000394633 ZNF850A8MQ14 1090 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 NPIPA2E9PIF3 369 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 NPIPA3F8WFD2 350 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 TP53I11O14683 189 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 ONECUT2O95948 504 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 APOC1P02654 83 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 ZNF883P0CG24 379 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 ZNF728P0DKX0 622 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 RAB5BP61020 215 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 RSU1Q15404 277 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 SUMF1Q8NBK3 374 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 DYRK2Q92630 601 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 SPTSSAQ969W0 71 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 MARS2Q96GW9 593 aaKnown RBP15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 HSF4Q9ULV5 492 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 KCNIP3Q9Y2W7 256 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 RIF1Q5UIP0 2472 aaKnown RBP15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 FAM230AA0A1W2PPH8 454 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 PTAFRP25105 342 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 SNRPEP62304 92 aaKnown RBP15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 TSPO2Q5TGU0 170 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 LYZL2Q7Z4W2 148 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 C20orf196Q8IYI0 205 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 GALNT14Q96FL9 552 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 RPS10P5Q9NQ39 176 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 FOXD3Q9UJU5 478 aaPredicted RBP15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 NXT1Q9UKK6 140 aaKnown RBP15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 ZDHHC8Q9ULC8 765 aa15.94■□□□□ 0.14
PCDHA1-202ENST00000394633 A0A087WZY1 265 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 XRCC2O43543 280 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 DIRAS3O95661 229 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 SEC11BP0C7V7 166 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 DANCRP0C864 163 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 CD59P13987 128 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 DTYMKP23919 212 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 DUSP3P51452 185 aaPredicted RBP15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 UCP2P55851 309 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 PRSS12P56730 875 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 HMGN3Q15651 99 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 TMEM156Q8N614 296 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 ZIC4Q8N9L1 334 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 RTN4IP1Q8WWV3 396 aaPredicted RBP15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 SPSB1Q96BD6 273 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 GNRHR2Q96P88 292 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 GINS3Q9BRX5 216 aa15.93■□□□□ 0.14
PCDHA1-202ENST00000394633 H7C1Q1 480 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 GPR137BO60478 399 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 ACAA1P09110 424 aaPredicted RBP15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 HOXB1P14653 301 aaPredicted RBP15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 CRYGSP22914 178 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 CHATP28329 748 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 FXYD4P59646 89 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 GUK1Q16774 197 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 ABCA11PQ4W5N1 156 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 ULBP2Q9BZM5 246 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 ATPIF1Q9UII2 106 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 PRR33A8MZF0 331 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 FHITP49789 147 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 ZNF616Q08AN1 781 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 PCOLCEQ15113 449 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 PHLDA2Q53GA4 152 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 AWAT1Q58HT5 328 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 RAET1LQ5VY80 246 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms