RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 USB1Q9BQ65 265 aaKnown RBP14.16□□□□□ -0.14
PCDH1-203ENST00000394536 A0A1W2PPE2 198 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 TTLL8A6PVC2 850 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 SLC34A2O95436 690 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 PGA4P0DJD7 388 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 PGA3P0DJD8 388 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 ECI1P42126 302 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 RAB11AP62491 216 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 NAAAQ02083 359 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 LCN15Q6UWW0 184 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 OBSL1O75147 1896 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 NKX6-1P78426 367 aaPredicted RBP14.15□□□□□ -0.14
PCDH1-203ENST00000394536 NCMAPQ5T1S8 102 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 SHEQ5VZ18 495 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 HIST2H3AQ71DI3 136 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 DPPA2Q7Z7J5 298 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 SLC25A45Q8N413 288 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 APCDD1LQ8NCL9 501 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 PSMF1Q92530 271 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 EDEM2Q9BV94 578 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 DUSP23Q9BVJ7 150 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 P4HTMQ9NXG6 502 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 IL2RAP01589 272 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 HOXA1P49639 335 aaPredicted RBP14.15□□□□□ -0.14
PCDH1-203ENST00000394536 DHRS11Q6UWP2 260 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 WDSUB1Q8N9V3 476 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 OR10S1Q8NGN2 331 aa14.15□□□□□ -0.14
PCDH1-203ENST00000394536 TRAF3IP2O43734 574 aaPredicted RBP14.14□□□□□ -0.15
PCDH1-203ENST00000394536 CLEC12BQ2HXU8 276 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 SMRP1Q8NCR6 262 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 AGBL5Q8NDL9 886 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 OR1J1Q8NGS3 322 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 NIPSNAP3BQ9BS92 247 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 MYOZ1Q9NP98 299 aaPredicted RBP14.14□□□□□ -0.15
PCDH1-203ENST00000394536 GNG13Q9P2W3 67 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 MTCH2Q9Y6C9 303 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 ALDH3B1P43353 468 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 HAAOP46952 286 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 WDR5BQ86VZ2 330 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 SNIP1Q8TAD8 396 aaKnown RBP14.14□□□□□ -0.15
PCDH1-203ENST00000394536 NAA60Q9H7X0 242 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 CD300LBA8K4G0 201 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 ZNF814B7Z6K7 855 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 SYNGR4O95473 234 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 SLC2A9Q9NRM0 540 aa14.14□□□□□ -0.15
PCDH1-203ENST00000394536 MELTFP08582 738 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 CCL3P10147 92 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 S100PP25815 95 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 OR2M3Q8NG83 312 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 RCC2Q9P258 522 aaKnown RBP14.13□□□□□ -0.15
PCDH1-203ENST00000394536 NOSIPQ9Y314 301 aaKnown RBP14.13□□□□□ -0.15
PCDH1-203ENST00000394536 A0A0A6YYD4 124 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 HKR1P10072 659 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 WIPI1Q5MNZ9 446 aaPredicted RBP14.13□□□□□ -0.15
PCDH1-203ENST00000394536 KMT5CQ86Y97 462 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 OR1F12Q8NHA8 337 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 ERGIC1Q969X5 290 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 CYYR1Q96J86 154 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 OCIAD1Q9NX40 245 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 MCTS1Q9ULC4 181 aaKnown RBP14.13□□□□□ -0.15
PCDH1-203ENST00000394536 XIRP2A4UGR9 3374 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 CTSDP07339 412 aaPredicted RBP14.13□□□□□ -0.15
PCDH1-203ENST00000394536 PCBD1P61457 104 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 AADACL3Q5VUY0 350 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 THNSL2Q86YJ6 484 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 OR4A4PQ8NGN8 299 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 IP6K3Q96PC2 410 aa14.13□□□□□ -0.15
PCDH1-203ENST00000394536 RTBDNQ9BSG5 229 aaPredicted RBP14.13□□□□□ -0.15
PCDH1-203ENST00000394536 PI4KAP42356 2102 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 C5orf63A6NC05 138 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 MFNGO00587 321 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 GDF9O60383 454 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 IFNA4P05014 189 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 ZNF708P17019 499 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 CDCP2Q5VXM1 449 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 TMEM230Q96A57 120 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 TCEAL7Q9BRU2 100 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 PHF7Q9BWX1 381 aaPredicted RBP14.12□□□□□ -0.15
PCDH1-203ENST00000394536 FAM117AQ9C073 453 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 MT-ND4LP03901 98 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 FABP1P07148 127 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 C17orf78Q8N4C9 275 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 OR5C1Q8NGR4 320 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 CPT1CQ8TCG5 803 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 OCSTAMPQ9BR26 566 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 LHX6Q9UPM6 363 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 TIMM10BQ9Y5J6 103 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 GPR137BO60478 399 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 GABRA4P48169 554 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 TESK1Q15569 626 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 NAT6Q93015 286 aa14.12□□□□□ -0.15
PCDH1-203ENST00000394536 C5orf49A4QMS7 147 aa14.11□□□□□ -0.15
PCDH1-203ENST00000394536 AQP7P3A6NL99 342 aa14.11□□□□□ -0.15
PCDH1-203ENST00000394536 LDLRAD4O15165 306 aa14.11□□□□□ -0.15
PCDH1-203ENST00000394536 ELLP55199 621 aaPredicted RBP14.11□□□□□ -0.15
PCDH1-203ENST00000394536 SNAI3Q3KNW1 292 aa14.11□□□□□ -0.15
PCDH1-203ENST00000394536 AQP10Q96PS8 301 aa14.11□□□□□ -0.15
PCDH1-203ENST00000394536 SLC35B3Q9H1N7 401 aa14.11□□□□□ -0.15
PCDH1-203ENST00000394536 IGKV1-9A0A0C4DH69 117 aa14.11□□□□□ -0.15
PCDH1-203ENST00000394536 MEX3AA1L020 520 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms