RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 GINS4Q9BRT9 223 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 PKIBQ9C010 78 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 COQ3Q9NZJ6 369 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 ZNF230Q9UIE0 474 aaPredicted RBP7.37□□□□□ -1.23
TDP1-203ENST00000393454 ZNF107Q9UII5 783 aaPredicted RBP7.37□□□□□ -1.23
TDP1-203ENST00000393454 PLEKHA6Q9Y2H5 1048 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 CADP27708 2225 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 NBASA2RRP1 2371 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 UBE2QL1A1L167 161 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 DISC1C4P0D8 188 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 F5H5P2 479 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 CDIPTO14735 213 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 ARPC1BO15143 372 aaKnown RBP7.36□□□□□ -1.23
TDP1-203ENST00000393454 MLNRO43193 412 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 RHBDL1O75783 438 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 PMP2P02689 132 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 AMY2BP19961 511 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 CHATP28329 748 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 ASCL1P50553 236 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 FGF12P61328 243 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 RPS23P62266 143 aaKnown RBP7.36□□□□□ -1.23
TDP1-203ENST00000393454 CD300CQ08708 224 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 IL24Q13007 206 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 MEF2DQ14814 521 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 ELP2Q6IA86 826 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 WDR86Q86TI4 376 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 OR4K15Q8NH41 348 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 MAFIPQ8WZ33 124 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 EMG1Q92979 244 aaKnown RBP7.36□□□□□ -1.23
TDP1-203ENST00000393454 FBXW5Q969U6 566 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 PPP1R14BQ96C90 147 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 HS3ST6Q96QI5 342 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 CMSS1Q9BQ75 279 aaKnown RBP7.36□□□□□ -1.23
TDP1-203ENST00000393454 SYT3Q9BQG1 590 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 OCSTAMPQ9BR26 566 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 CXXC4Q9H2H0 198 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 ZNF442Q9H7R0 627 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.36□□□□□ -1.23
TDP1-203ENST00000393454 ZNF701Q9NV72 531 aaPredicted RBP7.36□□□□□ -1.23
TDP1-203ENST00000393454 SCP2D1Q9UJQ7 156 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 HSF4Q9ULV5 492 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 NBEAQ8NFP9 2946 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 A0A0A6YYJ9 748 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 A6NLC8 198 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 TMEM210A6NLX4 147 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 BOLA2-SMG1P6H3BVE0 249 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 ATXN7O15265 892 aaPredicted RBP7.36□□□□□ -1.23
TDP1-203ENST00000393454 PDCD6O75340 191 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 CCNKO75909 580 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 NDUFB6O95139 128 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 CD74P04233 296 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 RLN1P04808 185 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 IFNA6P05013 189 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 THBDP07204 575 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 FUT3P21217 361 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 PTAFRP25105 342 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 DUSP1P28562 367 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 CHRNB4P30926 498 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 HRH1P35367 487 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 KLF3P57682 345 aaPredicted RBP7.36□□□□□ -1.23
TDP1-203ENST00000393454 SELENOVP59797 346 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 CBX3Q13185 183 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 IKZF1Q13422 519 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 SNTB1Q13884 538 aaKnown RBP7.36□□□□□ -1.23
TDP1-203ENST00000393454 RBMS2Q15434 407 aaKnown RBP7.36□□□□□ -1.23
TDP1-203ENST00000393454 MSMPQ1L6U9 139 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 SLC22A25Q6T423 547 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 PCSK4Q6UW60 755 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 SEZ6L2Q6UXD5 910 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 IDO2Q6ZQW0 420 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 Q6ZR03 302 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 FAM58AQ8N1B3 248 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 Q8NFD4 153 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 DYRK2Q92630 601 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 WFIKKN1Q96NZ8 548 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 SULT4A1Q9BR01 284 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 HDHD3Q9BSH5 251 aaPredicted RBP7.36□□□□□ -1.23
TDP1-203ENST00000393454 IL36RNQ9UBH0 155 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 AK3Q9UIJ7 227 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 POLDIP2Q9Y2S7 368 aa7.36□□□□□ -1.23
TDP1-203ENST00000393454 ACACBO00763 2458 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 PLSCR5A0PG75 271 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 NKX2-6A6NCS4 301 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 HMX3A6NHT5 357 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 C3orf80F5H4A9 247 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 ABCD4O14678 606 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 PEX14O75381 377 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 CA11O75493 328 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 ZNF250P15622 560 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 PPP3CBP16298 524 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 MPZP25189 248 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 OR3A3P47888 321 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 NKX6-1P78426 367 aaPredicted RBP7.35□□□□□ -1.23
TDP1-203ENST00000393454 BSPH1Q075Z2 132 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 ZNF154Q13106 437 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 FAM76BQ5HYJ3 339 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 SSX8Q7RTT4 187 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 HOGA1Q86XE5 327 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 SPERTQ8NA61 448 aa7.35□□□□□ -1.23
TDP1-203ENST00000393454 BEST4Q8NFU0 473 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms