RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 POLR2GP62487 172 aaKnown RBP eCLIP11.64□□□□□ -0.55
LCA5-202ENST00000392959 FAM109BQ6ICB4 259 aaPredicted RBP11.64□□□□□ -0.55
LCA5-202ENST00000392959 CXorf67Q86X51 503 aaPredicted RBP11.64□□□□□ -0.55
LCA5-202ENST00000392959 C17orf78Q8N4C9 275 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 OR8B12Q8NGG6 310 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 LPAR3Q9UBY5 353 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 ZMIZ1Q9ULJ6 1067 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 ATG2BQ96BY7 2078 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 TRGV5A0A0B4J1U4 118 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 LOC102723971A0A1B0GUV8 181 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 ST8SIA5O15466 376 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 HRASP01112 189 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 MEOX2P50222 304 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 HLA-DRB3P79483 266 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 KLF9Q13886 244 aaPredicted RBP11.64□□□□□ -0.55
LCA5-202ENST00000392959 OR2A2Q6IF42 318 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 CADM4Q8NFZ8 388 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 OR6X1Q8NH79 312 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 P4HTMQ9NXG6 502 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 NAT8BQ9UHF3 227 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 ICAM5Q9UMF0 924 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 ZNF318Q5VUA4 2279 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 LINC00862A6NCI5 91 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 RRP8O43159 456 aaKnown RBP11.64□□□□□ -0.55
LCA5-202ENST00000392959 WISP3O95389 354 aaPredicted RBP11.64□□□□□ -0.55
LCA5-202ENST00000392959 HOXC8P31273 242 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 HIST1H3AP68431 136 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 OR1C1Q15619 314 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 PLA2G2FQ9BZM2 168 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 PARD6AQ9NPB6 346 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 SOX15O60248 233 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 FCGR3BO75015 233 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 OR5I1Q13606 314 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 LIAT1Q6ZQX7 453 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 PECRQ9BY49 303 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 ZFP64Q9NPA5 681 aa11.64□□□□□ -0.55
LCA5-202ENST00000392959 MRPS18AQ9NVS2 196 aaKnown RBP11.64□□□□□ -0.55
LCA5-202ENST00000392959 TOX3O15405 576 aaPredicted RBP11.63□□□□□ -0.55
LCA5-202ENST00000392959 SOCS1O15524 211 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 ZNF737O75373 536 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 IL24Q13007 206 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 IL11RAQ14626 422 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 STUMQ69YW2 141 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 GUSBP11Q6P575 273 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 CARFQ8N187 725 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 ZNF784Q8NCA9 323 aaPredicted RBP11.63□□□□□ -0.55
LCA5-202ENST00000392959 OR4D10Q8NGI6 311 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 RPS4Y2Q8TD47 263 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 GPA33Q99795 319 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 ESRP2Q9H6T0 727 aaKnown RBP11.63□□□□□ -0.55
LCA5-202ENST00000392959 TRAV8-7A0A075B6U6 113 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 A0A1W2PNV4 684 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 RBFOX3A6NFN3 312 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 ZXDAP98168 799 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 IGFBP7Q16270 282 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 ETV3LQ6ZN32 361 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 NOL4LQ96MY1 436 aaPredicted RBP11.63□□□□□ -0.55
LCA5-202ENST00000392959 PPP1R3EQ9H7J1 279 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 ZNF107Q9UII5 783 aaPredicted RBP11.63□□□□□ -0.55
LCA5-202ENST00000392959 PSG11Q9UQ72 335 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 ZFC3H1O60293 1989 aaKnown RBP11.63□□□□□ -0.55
LCA5-202ENST00000392959 SHISA7A6NL88 538 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 AP4M1O00189 453 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 LANCL1O43813 399 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 PATE4P0C8F1 98 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 PAX6P26367 422 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 RNPS1Q15287 305 aaKnown RBP11.63□□□□□ -0.55
LCA5-202ENST00000392959 AWAT1Q58HT5 328 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 COL13A1Q5TAT6 717 aaPredicted RBP11.63□□□□□ -0.55
LCA5-202ENST00000392959 ZAR1Q86SH2 424 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 SLC25A42Q86VD7 318 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 OR10D3Q8NH80 312 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 MS4A10Q96PG2 267 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 LRFN3Q9BTN0 628 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 SLC25A22Q9H936 323 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 TIMM9Q9Y5J7 89 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 COL18A1P39060 1754 aa11.63□□□□□ -0.55
LCA5-202ENST00000392959 C7orf66A4D0T2 115 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 COL9A1P20849 921 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 CHRNA7P36544 502 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 CLPPQ16740 277 aaPredicted RBP11.62□□□□□ -0.55
LCA5-202ENST00000392959 VMA21Q3ZAQ7 101 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 ACER2Q5QJU3 275 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 TMEM56Q96MV1 263 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 CBY1Q9Y3M2 126 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 SPRY3O43610 288 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 ARG1P05089 322 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 CDC34P49427 236 aaPredicted RBP11.62□□□□□ -0.55
LCA5-202ENST00000392959 PNRC1Q12796 327 aaPredicted RBP11.62□□□□□ -0.55
LCA5-202ENST00000392959 CBLN2Q8IUK8 224 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 OR2Z1Q8NG97 314 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 NUBPLQ8TB37 319 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 PLA2G3Q9NZ20 509 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 ARAP2Q8WZ64 1704 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 CELA2BP08218 269 aaPredicted RBP11.62□□□□□ -0.55
LCA5-202ENST00000392959 TNFRSF1AP19438 455 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 HYAL1Q12794 435 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 TMEM92Q6UXU6 159 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 SLC16A13Q7RTY0 426 aa11.62□□□□□ -0.55
LCA5-202ENST00000392959 OR13G1Q8NGZ3 307 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms