RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CA2P00918 260 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 FAM3BP58499 235 aaPredicted RBP13.24□□□□□ -0.29
CCDC50-201ENST00000392455 ASB5Q8WWX0 329 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 COA3Q9Y2R0 106 aaPredicted RBP13.24□□□□□ -0.29
CCDC50-201ENST00000392455 KCNMB2Q9Y691 235 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 ZNF815PA8K554 130 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 PRSS37A4D1T9 235 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 SS18L1O75177 396 aaPredicted RBP13.24□□□□□ -0.29
CCDC50-201ENST00000392455 MT-ND6P03923 174 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 CRHP06850 196 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 PCNPQ8WW12 178 aaKnown RBP13.24□□□□□ -0.29
CCDC50-201ENST00000392455 FGF21Q9NSA1 209 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 FAM53CQ9NYF3 392 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 IDSB3KWA1 339 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 RBFOX2O43251 390 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCDC50-201ENST00000392455 CD22P20273 847 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 NMUP48645 174 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 DIO1P49895 249 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 CXorf36Q9H7Y0 433 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 EP300Q09472 2414 aaPredicted RBP13.23□□□□□ -0.29
CCDC50-201ENST00000392455 OR2W5A6NFC9 320 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 TMPRSS11DO60235 418 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 MPDU1O75352 247 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 MYOGP15173 224 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 VWA2Q5GFL6 755 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 TGIF2LXQ8IUE1 241 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 UBALD2Q8IYN6 164 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 HSD17B10Q99714 261 aaKnown RBP13.23□□□□□ -0.29
CCDC50-201ENST00000392455 LIPNQ5VXI9 398 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 TOPAZ1Q8N9V7 1692 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 ZGRF1Q86YA3 2104 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 TUBGCP6Q96RT7 1819 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 SERF2P84101 59 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 STPG3Q8N7X2 389 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 OR1L6Q8NGR2 347 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 IFITM10A6NMD0 228 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 HMSDA8MTL9 139 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 CDX4O14627 284 aaPredicted RBP13.23□□□□□ -0.29
CCDC50-201ENST00000392455 SLC25A30Q5SVS4 291 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 TGIF2LYQ8IUE0 185 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 OR13G1Q8NGZ3 307 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 CGGBP1Q9UFW8 167 aaPredicted RBP13.23□□□□□ -0.29
CCDC50-201ENST00000392455 SOX21Q9Y651 276 aaPredicted RBP13.23□□□□□ -0.29
CCDC50-201ENST00000392455 ALKAL1Q6UXT8 129 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 WFIKKN1Q96NZ8 548 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 GPA33Q99795 319 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 NTNG1Q9Y2I2 539 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 NPTNQ9Y639 398 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 OR2J2O76002 312 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 PPP1R17O96001 155 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 FAM219AQ8IW50 185 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 OR52B4Q8NGK2 314 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 PPIAP62937 165 aaKnown RBP13.23□□□□□ -0.29
CCDC50-201ENST00000392455 KCNAB1Q14722 419 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 NHSL2Q5HYW2 709 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 OR2G2Q8NGZ5 317 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 MCHR2Q969V1 340 aa13.23□□□□□ -0.29
CCDC50-201ENST00000392455 CXorf1O96002 111 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 APCSP02743 223 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 GAMTQ14353 236 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 PARM1Q6UWI2 310 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 SPICQ8N5J4 248 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 SAP30LQ9HAJ7 183 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 RAXQ9Y2V3 346 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 MBTPS2O43462 519 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 SLCO4C1Q6ZQN7 724 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 PSMG3Q9BT73 122 aaPredicted RBP13.22□□□□□ -0.29
CCDC50-201ENST00000392455 PBOV1Q9GZY1 135 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 KCNAB3O43448 404 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 MARCH1Q8TCQ1 289 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 Q8WTZ3 238 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 GEMIN2O14893 280 aaKnown RBP13.22□□□□□ -0.29
CCDC50-201ENST00000392455 FUT7Q11130 342 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 RASL11BQ9BPW5 248 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 TXNDC17Q9BRA2 123 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 TBX21Q9UL17 535 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 RER1O15258 196 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 AKR7A3O95154 331 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 CSF2RBP32927 897 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 GAB4Q2WGN9 574 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 BCDIN3DQ7Z5W3 292 aaKnown RBP13.22□□□□□ -0.29
CCDC50-201ENST00000392455 C1orf174Q8IYL3 243 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 OR13H1Q8NG92 308 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 NIPSNAP1Q9BPW8 284 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 IGHV3-20A0A0C4DH32 117 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 TAPBPO15533 448 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 ELFN2Q5R3F8 820 aa13.22□□□□□ -0.29
CCDC50-201ENST00000392455 LIPAP38571 399 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 LIM2P55344 173 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 UBE2L3P68036 154 aaKnown RBP13.21□□□□□ -0.29
CCDC50-201ENST00000392455 GPNMBQ14956 572 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 LGALSLQ3ZCW2 172 aaPredicted RBP13.21□□□□□ -0.29
CCDC50-201ENST00000392455 SIRT6Q8N6T7 355 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 CRYGNQ8WXF5 182 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 SLC25A19Q9HC21 320 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 IGHA1P01876 353 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 IGHA2P01877 340 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 TRAV34A0A0B4J273 112 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 OIT3Q8WWZ8 545 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 SCMH1Q96GD3 660 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms