RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 FGFR1OP2Q9NVK5 253 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 GIN1Q9NXP7 522 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 RCL1Q9Y2P8 373 aaKnown RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ARL2BPQ9Y2Y0 163 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 NDUFAF1Q9Y375 327 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 AK6Q9Y3D8 172 aaKnown RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 NUBP2Q9Y5Y2 271 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 F11RQ9Y624 299 aaKnown RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 USH1CQ9Y6N9 552 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TMEM56-RWDD3S4R434 201 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 PRDM2Q13029 1718 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 CHD5Q8TDI0 1954 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 UBN2Q6ZU65 1347 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 FLT4P35916 1363 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 ABCC11Q96J66 1382 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 SHROOM3Q8TF72 1996 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TRAV8-7A0A075B6U6 113 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 IGKV3D-11A0A0A0MRZ8 115 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 GLYATL1P3A0A0U1RQE8 302 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 A0A1B0GVX0 72 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 METTL15A6NJ78 407 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 OR11H12B2RN74 326 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 C21orf140B9A014 251 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 C12orf77C9JDV5 145 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 FTCDNL1E5RQL4 147 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 ATP6V1G2-DDX39BF2Z307 99 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 F5H5T6 163 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 PSMD12O00232 456 aaPredicted RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 DFFAO00273 331 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CXCR6O00574 342 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 PLPP1O14494 284 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TCAPO15273 167 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 RGS16O15492 202 aaPredicted RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 NUPL2O15504 423 aaKnown RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 MPZL2O60487 215 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CST8O60676 142 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 SHOX2O60902 331 aaPredicted RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 ALOX12BO75342 701 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 ATP5LO75964 103 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 AQP8O94778 261 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 KRT75O95678 551 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 AP2A1O95782 977 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 HLA-AP01891 365 aaKnown RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CD74P04233 296 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 IFNA16P05015 189 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 BCHEP06276 602 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 C2P06681 752 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 RHOCP08134 193 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 LINC00869P0C866 280 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 SCGB1A1P11684 91 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 GFAPP14136 432 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CSNK2A2P19784 350 aaPredicted RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 PSMA1P25786 263 aaKnown RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 LOXP28300 417 aaPredicted RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 GCAP28676 217 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 ARR3P36575 388 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CEACAM6P40199 344 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 VHLP40337 213 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 GSSP48637 474 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 STC1P52823 247 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 UGT2B15P54855 530 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 OR2B8PP59922 312 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 SLC35B1P78383 322 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 RPL19P84098 196 aaKnown RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 SYCNQ0VAF6 134 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 IRF4Q15306 451 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TAL2Q16559 108 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TRMT5Q32P41 509 aaKnown RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 SPIN4Q56A73 249 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 OR10J3Q5JRS4 329 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 OGFRL1Q5TC84 451 aaPredicted RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 FBXW9Q5XUX1 488 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TRIQKQ629K1 86 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TMEM42Q69YG0 159 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 LCN12Q6JVE5 192 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 MED27Q6P2C8 311 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CD200R1LQ6Q8B3 271 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CASP12Q6UXS9 341 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 Q6ZT83 130 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TMEM179Q6ZVK1 233 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TMEM144Q7Z5S9 345 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 BBS7Q8IWZ6 715 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CMTM1Q8IZ96 169 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CLDN22Q8N7P3 220 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 HSD17B11Q8NBQ5 300 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 ATP6V1C2Q8NEY4 427 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 OR11H1Q8NG94 326 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 OR1M1Q8NGA1 313 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 OR10X1Q8NGY0 326 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 OR6K3Q8NGY3 331 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 OR11H2Q8NH07 326 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 OR5K2Q8NHB8 316 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 LYPD6BQ8NI32 183 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 KCTD4Q8WVF5 259 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 OR8D1Q8WZ84 308 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CXorf40BQ96DE9 158 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CCDC126Q96EE4 140 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 Q96MT0 163 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms