RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 PRR18Q8N4B5 295 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 WDR31Q8NA23 367 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 ZSCAN4Q8NAM6 433 aaPredicted RBP8.69□□□□□ -1.02
LTN1-203ENST00000389195 TOMM40LQ969M1 308 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 RBMXL1Q96E39 390 aaKnown RBP8.69□□□□□ -1.02
LTN1-203ENST00000389195 ACTR6Q9GZN1 396 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 WDR13Q9H1Z4 485 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 ZNF442Q9H7R0 627 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 NOP16Q9Y3C1 178 aaKnown RBP8.69□□□□□ -1.02
LTN1-203ENST00000389195 C13orf42A0A1B0GVH6 325 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 EEF1E1-BLOC1S5C9J1V9 151 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 XRCC2O43543 280 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 ADAP1O75689 374 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 CD74P04233 296 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 CPT2P23786 658 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 OR3A3P47888 321 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 FUT6P51993 359 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 MPPED2Q15777 294 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 MSMPQ1L6U9 139 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 SP6Q3SY56 376 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 IGSF11Q5DX21 431 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 C20orf204Q6ZNR8 217 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 ZDHHC23Q8IYP9 409 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 FTMTQ8N4E7 242 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 OR5T2Q8NGG2 359 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 C15orf40Q8WUR7 153 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 SPSB4Q96A44 273 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 C5orf66Q9H5L9 145 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 SCPEP1Q9HB40 452 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 SCP2D1Q9UJQ7 156 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 PKD1L2Q7Z442 2459 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 WNT9BO14905 357 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 ARPC5O15511 151 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 SMPD2O60906 423 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 RGS11O94810 467 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 CECR9P0C854 216 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 TRAPPC2P0DI81 140 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 TRAPPC2BP0DI82 140 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 PGAM2P15259 253 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 PRKACAP17612 351 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 PPP1CBP62140 327 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 C6orf183Q5T699 404 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 AADACL3Q5VUY0 350 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 OR2W3Q7Z3T1 314 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 Q8NA96 180 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 OR2AK2Q8NG84 335 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 OR5H2Q8NGV7 314 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 NEK7Q8TDX7 302 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 CCDC107Q8WV48 283 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 EMG1Q92979 244 aaKnown RBP8.68□□□□□ -1.02
LTN1-203ENST00000389195 SPSB1Q96BD6 273 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 CMSS1Q9BQ75 279 aaKnown RBP8.68□□□□□ -1.02
LTN1-203ENST00000389195 DPCDQ9BVM2 203 aaPredicted RBP8.68□□□□□ -1.02
LTN1-203ENST00000389195 IRF2BPLQ9H1B7 796 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 DUSP13Q9UII6 198 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 CFAP46Q8IYW2 2715 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 ACACBO00763 2458 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 HRNRQ86YZ3 2850 aaPredicted RBP8.68□□□□□ -1.02
LTN1-203ENST00000389195 FXYD6-FXYD2A0A087WZ82 144 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 CFDP00746 253 aaPredicted RBP8.68□□□□□ -1.02
LTN1-203ENST00000389195 CALCRP30988 508 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 IL13RA1P78552 427 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 SORDQ00796 357 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 CHRFAM7AQ494W8 412 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 IGF2-ASQ6U949 168 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 LHFPL2Q6ZUX7 228 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 ASCC1Q8N9N2 400 aaKnown RBP8.68□□□□□ -1.02
LTN1-203ENST00000389195 ZNF2Q9BSG1 426 aaPredicted RBP8.68□□□□□ -1.02
LTN1-203ENST00000389195 FXYD6Q9H0Q3 95 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 ESRP2Q9H6T0 727 aaKnown RBP8.68□□□□□ -1.02
LTN1-203ENST00000389195 ASF1BQ9NVP2 202 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 MED13LQ71F56 2210 aa8.68□□□□□ -1.02
LTN1-203ENST00000389195 PQLC2LA1A4F0 135 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 DISC1C4P0D8 188 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 F5H5P2 479 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 TMEM127O75204 238 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 PRKACBP22694 351 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 UCP2P55851 309 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 IKZF1Q13422 519 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 TBC1D28Q2M2D7 210 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 LY6G6FQ5SQ64 297 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 SEZ6L2Q6UXD5 910 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 Q6ZSR3 168 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 STEAP2Q8NFT2 490 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 S100PBPQ96BU1 408 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 CDH20Q9HBT6 801 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 PLSCR2Q9NRY7 297 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 ZNF175Q9Y473 711 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 SULT1C2O00338 296 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 RCC1P18754 421 aaPredicted RBP8.67□□□□□ -1.02
LTN1-203ENST00000389195 CXCL2P19875 107 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 CHATP28329 748 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 TGFBR3Q03167 851 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 GUSBP1Q15486 140 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 CEACAM21Q3KPI0 293 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 PHLDA2Q53GA4 152 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 PRAMEF6Q5VXH4 476 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 NSUN5P2Q63ZY6 315 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 SLC22A25Q6T423 547 aa8.67□□□□□ -1.02
LTN1-203ENST00000389195 FOXRED2Q8IWF2 684 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms