RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 ATXN7L3Q14CW9 347 aaPredicted RBP10.75□□□□□ -0.69
CIITA-202ENST00000381835 CCDC36Q8IYA8 594 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 BOLLQ8N9W6 283 aaKnown RBP10.75□□□□□ -0.69
CIITA-202ENST00000381835 ST6GALNAC3Q8NDV1 305 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 OR13C3Q8NGS6 347 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 ASB5Q8WWX0 329 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 CNTNAP3BQ96NU0 1288 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 CNTNAP3Q9BZ76 1288 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 DIDO1Q9BTC0 2240 aaKnown RBP10.75□□□□□ -0.69
CIITA-202ENST00000381835 ISG15P05161 165 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 ZNF735P0CB33 412 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 HOXC12P31275 282 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 PLP2Q04941 152 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 ZNF474Q6S9Z5 364 aaPredicted RBP10.75□□□□□ -0.69
CIITA-202ENST00000381835 OR2W3Q7Z3T1 314 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 MDP1Q86V88 176 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 OR5T2Q8NGG2 359 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 PHYHIPLQ96FC7 376 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 SLC6A7Q99884 636 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 SOX7Q9BT81 388 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 PLEKHA6Q9Y2H5 1048 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 IGSF10Q6WRI0 2623 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 LOC100509620A0A075B734 347 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 DISC1C4P0D8 188 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 SYT7O43581 403 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 LMX1BO60663 402 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 LCATP04180 440 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 OPRM1P35372 400 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 CASP6P55212 293 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 SRSF4Q08170 494 aaKnown RBP10.74□□□□□ -0.69
CIITA-202ENST00000381835 ESPL1Q14674 2120 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 P2RY6Q15077 328 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 NKPD1Q17RQ9 610 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 SNAI3Q3KNW1 292 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 DRAM2Q6UX65 266 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 ACOT7LQ6ZUV0 252 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 ZNF584Q8IVC4 421 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 JAGN1Q8N5M9 183 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 OR13C8Q8NGS7 320 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 PPP1R1CQ8WVI7 109 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 HEATR1Q9H583 2144 aaKnown RBP10.74□□□□□ -0.69
CIITA-202ENST00000381835 GPR84Q9NQS5 396 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 C5orf49A4QMS7 147 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 PCP4L1A6NKN8 68 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 ABCD4O14678 606 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 CD74P04233 296 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 CAPZA1P52907 286 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 ATP1B3P54709 279 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 SNTB1Q13884 538 aaKnown RBP10.74□□□□□ -0.69
CIITA-202ENST00000381835 MOGAT2Q3SYC2 334 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 PAN3Q58A45 887 aaKnown RBP10.74□□□□□ -0.69
CIITA-202ENST00000381835 OR10K2Q6IF99 312 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 DPPA2Q7Z7J5 298 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 OR4S1Q8NGB4 309 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 FAM71F1Q96KD3 344 aaPredicted RBP10.74□□□□□ -0.69
CIITA-202ENST00000381835 PIGMQ9H3S5 423 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 OSGIN2Q9Y236 505 aa10.74□□□□□ -0.69
CIITA-202ENST00000381835 RNF222A6NCQ9 220 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 TMEM235A6NFC5 223 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 IGFBP3P17936 291 aaPredicted RBP10.73□□□□□ -0.69
CIITA-202ENST00000381835 FLI1Q01543 452 aaPredicted RBP10.73□□□□□ -0.69
CIITA-202ENST00000381835 SPOCK1Q08629 439 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 KRTAP27-1Q3LI81 207 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 CDNFQ49AH0 187 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 FIP1L1Q6UN15 594 aaKnown RBP10.73□□□□□ -0.69
CIITA-202ENST00000381835 LINC00518Q8N0U6 118 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 OR51A2Q8NGJ7 313 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 THAP6Q8TBB0 222 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 VKORC1Q9BQB6 163 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 SAV1Q9H4B6 383 aaPredicted RBP10.73□□□□□ -0.69
CIITA-202ENST00000381835 ZNF629Q9UEG4 869 aaPredicted RBP10.73□□□□□ -0.69
CIITA-202ENST00000381835 ZNF107Q9UII5 783 aaPredicted RBP10.73□□□□□ -0.69
CIITA-202ENST00000381835 VSIG4Q9Y279 399 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 EPG5Q9HCE0 2579 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 A0A0A6YYH2 397 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 A6NJ64 397 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 F5H0A9 414 aaPredicted RBP10.73□□□□□ -0.69
CIITA-202ENST00000381835 MSTNO14793 375 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 FSTP19883 344 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 MEF2DQ14814 521 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 RNASE10Q5GAN6 216 aaKnown RBP10.73□□□□□ -0.69
CIITA-202ENST00000381835 BHLHA15Q7RTS1 189 aaPredicted RBP10.73□□□□□ -0.69
CIITA-202ENST00000381835 LYG2Q86SG7 212 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 SLC25A42Q86VD7 318 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 INO80EQ8NBZ0 244 aaPredicted RBP10.73□□□□□ -0.69
CIITA-202ENST00000381835 ACBD4Q8NC06 268 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 C1orf162Q8NEQ5 155 aaPredicted RBP10.73□□□□□ -0.69
CIITA-202ENST00000381835 OR2AE1Q8NHA4 323 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 RND1Q92730 232 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 PRRT1Q99946 306 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 OR10A2Q9H208 303 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 PURGQ9UJV8 347 aaKnown RBP10.73□□□□□ -0.69
CIITA-202ENST00000381835 PRELID3BQ9Y3B1 194 aa10.73□□□□□ -0.69
CIITA-202ENST00000381835 MEGF11A6BM72 1044 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 OR2AT4A6NND4 320 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 ATG12O94817 140 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 AGFG2O95081 481 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 CELA3BP08861 270 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 COX5BP10606 129 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 APLNRP35414 380 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms