RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 GPHA2Q96T91 129 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 SEMA5BQ9P283 1151 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 PADI1Q9ULC6 663 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 HDGFL3Q9Y3E1 203 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 IGKV1D-8A0A087WSZ0 117 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 FAM24AA6NFZ4 105 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 ZFP92A6NM28 416 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 TMEM150CB9EJG8 249 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 F5H5K5 113 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 CHRM2P08172 466 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 OR5AC1P0C628 307 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 MMP9P14780 707 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 LSM6P62312 80 aaKnown RBP12.16□□□□□ -0.46
SDC1-202ENST00000381150 ROM1Q03395 351 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 TLE3Q04726 772 aa12.16□□□□□ -0.46
SDC1-202ENST00000381150 ZNF107Q9UII5 783 aaPredicted RBP12.16□□□□□ -0.46
SDC1-202ENST00000381150 TNRC18O15417 2968 aaPredicted RBP12.16□□□□□ -0.46
SDC1-202ENST00000381150 CCDC85CA6NKD9 419 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 PIAS2O75928 621 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 DANCRP0C864 163 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 FSTP19883 344 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 BIDP55957 195 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 HSD11B2P80365 405 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 ZNF574Q6ZN55 896 aaPredicted RBP12.15□□□□□ -0.46
SDC1-202ENST00000381150 REC114Q7Z4M0 266 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 OR5T1Q8NG75 326 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 C11orf40Q8WZ69 217 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 MVB12AQ96EY5 273 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 WFIKKN1Q96NZ8 548 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 POMT1Q9Y6A1 747 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 PHF3Q92576 2039 aaKnown RBP12.15□□□□□ -0.46
SDC1-202ENST00000381150 ALDH3B1P43353 468 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 RAB1AP62820 205 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 FAM3AP98173 230 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 RUNX1Q01196 453 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 C9orf40Q8IXQ3 194 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 OR52M1Q8NGK5 317 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 FRZBQ92765 325 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 EMG1Q92979 244 aaKnown RBP12.15□□□□□ -0.46
SDC1-202ENST00000381150 ADAMTS20P59510 1910 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 RBFOX3A6NFN3 312 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 ARGFXA6NJG6 315 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 BGLAPP02818 100 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 FOLR1P15328 257 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 TBPP20226 339 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 RPL23AP62750 156 aaKnown RBP12.15□□□□□ -0.46
SDC1-202ENST00000381150 GNMTQ14749 295 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 SGCBQ16585 318 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 D2HGDHQ8N465 521 aa12.15□□□□□ -0.46
SDC1-202ENST00000381150 DHRS7CA6NNS2 312 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 PHF1O43189 567 aaPredicted RBP12.14□□□□□ -0.47
SDC1-202ENST00000381150 ANGPTL7O43827 346 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 TSPAN2O60636 221 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 PGCP20142 388 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 TAS2R60P59551 318 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 RND3P61587 244 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 SPIN3Q5JUX0 258 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 C1orf189Q5VU69 101 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 FDX2Q6P4F2 183 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 SLC25A45Q8N413 288 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 OR10AD1Q8NGE0 317 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 TUBA4BQ9H853 241 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 GNG13Q9P2W3 67 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 GAB2Q9UQC2 676 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 NBEAQ8NFP9 2946 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 E5RGE8 158 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 H3BP45 60 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 RER1O15258 196 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 FCGR2AP12318 317 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 PKIAP61925 76 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 TAF9Q16594 264 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 DNM1P34Q6PK57 102 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 BEND4Q6ZU67 534 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 MUCL1Q96DR8 90 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 NSG2Q9Y328 171 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 WSB1Q9Y6I7 421 aa12.14□□□□□ -0.47
SDC1-202ENST00000381150 APLNRP35414 380 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 TAS2R46P59540 309 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 ELOBQ15370 118 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 CARFQ8N187 725 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 RTN4IP1Q8WWV3 396 aaPredicted RBP12.13□□□□□ -0.47
SDC1-202ENST00000381150 FAM210BQ96KR6 192 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 UBE2ZQ9H832 354 aaPredicted RBP12.13□□□□□ -0.47
SDC1-202ENST00000381150 NSG1A0A0A6YYJ2 146 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 OR5H8P0DN80 308 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 PAX6P26367 422 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 ZNF121P58317 390 aaPredicted RBP12.13□□□□□ -0.47
SDC1-202ENST00000381150 SLC26A5P58743 744 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 BATFQ16520 125 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 WDFY1Q8IWB7 410 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 OR11L1Q8NGX0 322 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 CHST11Q9NPF2 352 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 HSPB2A8KAH6 182 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 GSTP1P09211 210 aaKnown RBP12.13□□□□□ -0.47
SDC1-202ENST00000381150 MYF5P13349 255 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 FOXK1P85037 733 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 HSPB2Q16082 182 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 ZNF441Q8N8Z8 693 aa12.13□□□□□ -0.47
SDC1-202ENST00000381150 FIGNL2A6NMB9 653 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 TMEM14DPA8MWL7 114 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms