RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 C12orf49Q9H741 205 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 RAB18Q9NP72 206 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 DECR2Q9NUI1 292 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 C14orf166Q9Y224 244 aaKnown RBP19.92■□□□□ 0.78
VPS16-201ENST00000380443 STARD10Q9Y365 291 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 MPC1Q9Y5U8 109 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 ZNF503-AS2A6NEH8 195 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 PLATP00750 562 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 HOXB1P14653 301 aaPredicted RBP19.92■□□□□ 0.78
VPS16-201ENST00000380443 ZNF345Q14585 488 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 TMEM211Q6ICI0 200 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 C11orf87Q6NUJ2 197 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 GSG1LQ6UXU4 331 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 ZNF546Q86UE3 836 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 MKXQ8IYA7 352 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 OR6K3Q8NGY3 331 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 CASTOR1Q8WTX7 329 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 ARL6Q9H0F7 186 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 NECAP2Q9NVZ3 263 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 GPR160Q9UJ42 338 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 ZNF407Q9C0G0 2248 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 OR2F2O95006 317 aa19.91■□□□□ 0.78
VPS16-201ENST00000380443 FUT3P21217 361 aa19.91■□□□□ 0.78
VPS16-201ENST00000380443 CALCRP30988 508 aa19.91■□□□□ 0.78
VPS16-201ENST00000380443 OR2F1Q13607 317 aa19.91■□□□□ 0.78
VPS16-201ENST00000380443 OR10AD1Q8NGE0 317 aa19.91■□□□□ 0.78
VPS16-201ENST00000380443 TMEM230Q96A57 120 aa19.91■□□□□ 0.78
VPS16-201ENST00000380443 NMES1Q9C002 83 aa19.91■□□□□ 0.78
VPS16-201ENST00000380443 DNAJC13O75165 2243 aa19.91■□□□□ 0.78
VPS16-201ENST00000380443 TMEM8BA6NDV4 472 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 GEMIN2O14893 280 aaKnown RBP19.9■□□□□ 0.78
VPS16-201ENST00000380443 B3GALNT1O75752 331 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 CEACAM4O75871 244 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 ESCO2Q56NI9 601 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 C6orf183Q5T699 404 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 DKK4Q9UBT3 224 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 KIF25Q9UIL4 384 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 TNRC6AQ8NDV7 1962 aaKnown RBP19.9■□□□□ 0.78
VPS16-201ENST00000380443 ARHGAP21Q5T5U3 1957 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 CD300LBA8K4G0 201 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 SDCBPO00560 298 aaPredicted RBP19.9■□□□□ 0.78
VPS16-201ENST00000380443 SFTPBP07988 381 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 FCGR3AP08637 254 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 PRSS12P56730 875 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 MRPL49Q13405 166 aaKnown RBP19.9■□□□□ 0.78
VPS16-201ENST00000380443 SRSF7Q16629 238 aaKnown RBP eCLIP19.9■□□□□ 0.78
VPS16-201ENST00000380443 DHRS11Q6UWP2 260 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 SLC25A26Q70HW3 274 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 KCTD9Q7L273 389 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 SLC51BQ86UW2 128 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 SARAFQ96BY9 339 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 SULT4A1Q9BR01 284 aa19.9■□□□□ 0.78
VPS16-201ENST00000380443 FREM1Q5H8C1 2179 aa19.89■□□□□ 0.77
VPS16-201ENST00000380443 ANKRD30BLA7E2S9 258 aa19.89■□□□□ 0.77
VPS16-201ENST00000380443 CTSDP07339 412 aaPredicted RBP19.89■□□□□ 0.77
VPS16-201ENST00000380443 CLEC18BQ6UXF7 455 aa19.89■□□□□ 0.77
VPS16-201ENST00000380443 CALHM1Q8IU99 346 aa19.89■□□□□ 0.77
VPS16-201ENST00000380443 THAP6Q8TBB0 222 aa19.89■□□□□ 0.77
VPS16-201ENST00000380443 ZNF286AQ9HBT8 521 aa19.89■□□□□ 0.77
VPS16-201ENST00000380443 RPS10-NUDT3A0A1W2PQS6 291 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 OR5B21A6NL26 309 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 C1QTNF9BB2RNN3 333 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 CFDP00746 253 aaPredicted RBP19.88■□□□□ 0.77
VPS16-201ENST00000380443 C1QTNF9P0C862 333 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 CCL2P13500 99 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 TBC1D28Q2M2D7 210 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 PIGYQ3MUY2 71 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 HIKESHIQ53FT3 197 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 LINC00596Q86U02 117 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 SLC30A7Q8NEW0 376 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 PPP1R1CQ8WVI7 109 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 BOD1Q96IK1 185 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 ZNF75AQ96N20 296 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 PLK3Q9H4B4 646 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 TNFSF18Q9UNG2 199 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 CSAG2Q9Y5P2 127 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 AKAP13Q12802 2813 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 PGAM2P15259 253 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 FGF12P61328 243 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 PMP22Q01453 160 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 MPV17LQ2QL34 196 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 TFAP2EQ6VUC0 442 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 FAM214BQ7L5A3 538 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 MDP1Q86V88 176 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 KCNRGQ8N5I3 272 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 HPSE2Q8WWQ2 592 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 MAFIPQ8WZ33 124 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 ZNF2Q9BSG1 426 aaPredicted RBP19.88■□□□□ 0.77
VPS16-201ENST00000380443 RHOFQ9HBH0 211 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 C12orf4Q9NQ89 552 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 ASPMQ8IZT6 3477 aa19.88■□□□□ 0.77
VPS16-201ENST00000380443 CEP295Q9C0D2 2601 aa19.87■□□□□ 0.77
VPS16-201ENST00000380443 OR5H8P0DN80 308 aa19.87■□□□□ 0.77
VPS16-201ENST00000380443 GUSBP1Q15486 140 aa19.87■□□□□ 0.77
VPS16-201ENST00000380443 ZNF660Q6AZW8 331 aaPredicted RBP19.87■□□□□ 0.77
VPS16-201ENST00000380443 Q6ZS49 121 aa19.87■□□□□ 0.77
VPS16-201ENST00000380443 ACOT7LQ6ZUV0 252 aa19.87■□□□□ 0.77
VPS16-201ENST00000380443 SCARB1Q8WTV0 552 aa19.87■□□□□ 0.77
VPS16-201ENST00000380443 WNT2BQ93097 391 aa19.87■□□□□ 0.77
VPS16-201ENST00000380443 IGKV1D-8A0A087WSZ0 117 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms