RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 OR2T8A6NH00 312 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 CEBPZOSA8MTT3 80 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 SOX1O00570 391 aaPredicted RBP7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 CDS2O95674 445 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 ADH1BP00325 375 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 LGALS2P05162 132 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 H2BFMP0C1H6 154 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 NPPBP16860 134 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 TSPOP30536 169 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 RAB9AP51151 201 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 GFRA1P56159 465 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 ARF3P61204 181 aaPredicted RBP7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 ARF1P84077 181 aaKnown RBP7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 OR2I1PQ8NGU4 316 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 ZPLD1Q8TCW7 415 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 SLAMF6Q96DU3 332 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 IMMP2LQ96T52 175 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 PYGO2Q9BRQ0 406 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 OR51I2Q9H344 312 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 CALHM2Q9HA72 323 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 TAS2R4Q9NYW5 299 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 SERTAD3Q9UJW9 196 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 ZNF443Q9Y2A4 671 aaPredicted RBP7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 ALPK2Q86TB3 2170 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 NSG1A0A0A6YYJ2 146 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 B3GAT3O94766 335 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 HRASP01112 189 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 TTRP02766 147 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 ATP1B2P14415 290 aaPredicted RBP7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 ZNF16P17020 682 aaPredicted RBP7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 GNRHRP30968 328 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 PAFAH1B2P68402 229 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 SMAD3P84022 425 aaKnown RBP7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 BSXQ3C1V8 233 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 PHF19Q5T6S3 580 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 OTPQ5XKR4 325 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 ATOH7Q8N100 152 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 CISD2Q8N5K1 135 aaKnown RBP7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 OR2M7Q8NG81 312 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 RPS4Y2Q8TD47 263 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 OR1E3Q8WZA6 343 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 PTPN18Q99952 460 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 RTBDNQ9BSG5 229 aaPredicted RBP7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 GTSF1LQ9H1H1 148 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 SRA1Q9HD15 236 aaKnown RBP7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 INSL5Q9Y5Q6 135 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 PLXND1Q9Y4D7 1925 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 DOCK4Q8N1I0 1966 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 DOCK6Q96HP0 2047 aa7.48□□□□□ -1.21
NHLRC3-201ENST00000379599 LOC102723971A0A1B0GUV8 181 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 TMEM212A6NML5 194 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 RBFOX2O43251 390 aaKnown RBP eCLIP7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 TRAF3IP2O43734 574 aaPredicted RBP7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 EFEMP2O95967 443 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 HBE1P02100 147 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 PSMB5P28074 263 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 CSNK1A1P48729 337 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 MSMO1Q15800 293 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 FFAR4Q5NUL3 377 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 TMEM144Q7Z5S9 345 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 RTN4RL2Q86UN3 420 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 BAGE3Q86Y29 109 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 BAGE2Q86Y30 109 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 KLHDC1Q8N7A1 406 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 OR5H2Q8NGV7 314 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 ZNF480Q8WV37 535 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 PPP1R14AQ96A00 147 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 RNF166Q96A37 237 aaPredicted RBP7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 RASD2Q96D21 266 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 KTI12Q96EK9 354 aaPredicted RBP7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 ATP6V0BQ99437 205 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 ABI3Q9P2A4 366 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 DHDHQ9UQ10 334 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 SLC22A13Q9Y226 551 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 CYC1P08574 325 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 MSR1P21757 451 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 GABRA3P34903 492 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 GRK6P43250 576 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 RPS20P60866 119 aaKnown RBP7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 UBE2NP61088 152 aaKnown RBP7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 RHOGP84095 191 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 ELAVL3Q14576 367 aaKnown RBP7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 KLHL24Q6TFL4 600 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 LCN15Q6UWW0 184 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 C1orf174Q8IYL3 243 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 LIN37Q96GY3 246 aaPredicted RBP7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 WNT10AQ9GZT5 417 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 SCN8AQ9UQD0 1980 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 DNAH12Q6ZR08 3092 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 IGHV1-69-2A0A0G2JMI3 117 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 STATHP02808 62 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 GLI4P10075 376 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 DNASE1L1P49184 302 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 RUNX1Q01196 453 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 NSDHLQ15738 373 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 LRRC73Q5JTD7 316 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 GPR157Q5UAW9 335 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 CNKSR3Q6P9H4 555 aa7.47□□□□□ -1.21
NHLRC3-201ENST00000379599 SHISA2Q6UWI4 295 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms