RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 IL20Q9NYY1 176 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 DCTN6O00399 190 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 CST7O76096 145 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 GP1BAP07359 652 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 PNLIPP16233 465 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 DCTDP32321 178 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 STARD6P59095 220 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 LYZP61626 148 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 KCNMB1Q16558 191 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 C10orf90Q96M02 699 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 ZNF665Q9H7R5 613 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 FBXO8Q9NRD0 319 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 RYDENQ9NUL5 291 aaKnown RBP9.68□□□□□ -0.86
LINC00654-201ENST00000379053 GAR1Q9NY12 217 aaKnown RBP9.68□□□□□ -0.86
LINC00654-201ENST00000379053 KPTNQ9Y664 436 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 TCRBV5S2A0A599 114 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 EPXP11678 715 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 SELENOPP49908 381 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 FAM3AP98173 230 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 CFHR1Q03591 330 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 GAMTQ14353 236 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 ZNF239Q16600 458 aaKnown RBP9.68□□□□□ -0.86
LINC00654-201ENST00000379053 BHLHA9Q7RTU4 235 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 WDR34Q96EX3 536 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 SMIM7Q9BQ49 75 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 PRDM6Q9NQX0 595 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 OR1A1Q9P1Q5 309 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 ZNF230Q9UIE0 474 aaPredicted RBP9.68□□□□□ -0.86
LINC00654-201ENST00000379053 LSM2Q9Y333 95 aaKnown RBP9.68□□□□□ -0.86
LINC00654-201ENST00000379053 CBY1Q9Y3M2 126 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 SOX15O60248 233 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 PDCD6O75340 191 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 CTLA4P16410 223 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 FAM27D1Q5T7N8 215 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 UNQ6494/PRO21346Q6UXR6 183 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 ARRDC1Q8N5I2 433 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 ADTRPQ96IZ2 230 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 PIMREGQ9BSJ6 248 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 CDIPTO14735 213 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 IGHV4-34P06331 123 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 PAX5Q02548 391 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 GUCA2AQ02747 115 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 OXA1LQ15070 435 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 ZIC1Q15915 447 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 SP6Q3SY56 376 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 HGDQ93099 445 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 NKX6-2Q9C056 277 aaPredicted RBP9.68□□□□□ -0.86
LINC00654-201ENST00000379053 WDR61Q9GZS3 305 aaKnown RBP9.68□□□□□ -0.86
LINC00654-201ENST00000379053 FOXD3Q9UJU5 478 aaPredicted RBP9.68□□□□□ -0.86
LINC00654-201ENST00000379053 FLVCR2Q9UPI3 526 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 SLC25A5P05141 298 aaKnown RBP9.67□□□□□ -0.86
LINC00654-201ENST00000379053 H3F3AP84243 136 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 SLC25A35Q3KQZ1 300 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 MAMSTRQ6ZN01 415 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 ZG16BQ96DA0 208 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 UQCC1Q9NVA1 299 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 MRPS18BQ9Y676 258 aaKnown RBP9.67□□□□□ -0.86
LINC00654-201ENST00000379053 PNPP00491 289 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 C1QBP02746 253 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 INO80CQ6PI98 192 aaPredicted RBP9.67□□□□□ -0.86
LINC00654-201ENST00000379053 SH2D5Q6ZV89 423 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 C6orf201Q7Z4U5 140 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 RAB18Q9NP72 206 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 PCDHGA9Q9Y5G4 932 aaKnown RBP9.67□□□□□ -0.86
LINC00654-201ENST00000379053 TTC3P53804 2025 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 TRAV1-2A0A0B4J238 106 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 A0A1W2PQD3 144 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 LIPT2A6NK58 231 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 SMAD7O15105 426 aaKnown RBP9.67□□□□□ -0.86
LINC00654-201ENST00000379053 MPZL1O95297 269 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 FBXW9Q5XUX1 488 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 THSD4Q6ZMP0 1018 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 LIMS2Q7Z4I7 341 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 TGIF2LYQ8IUE0 185 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 TGIF2LXQ8IUE1 241 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 ZNF683Q8IZ20 524 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 C11orf42Q8N5U0 333 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 BLNKQ8WV28 456 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 MOGAT1Q96PD6 335 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 SIRT3Q9NTG7 399 aaPredicted RBP9.67□□□□□ -0.86
LINC00654-201ENST00000379053 INSIG2Q9Y5U4 225 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 WNT1P04628 370 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 OR4C16Q8NGL9 310 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 RXFP4Q8TDU9 374 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 EID2BQ96D98 161 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 PIGMQ9H3S5 423 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 ITGB4P16144 1822 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 GNG7O60262 68 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 TRAPPC2P0DI81 140 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 TRAPPC2BP0DI82 140 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 SSBP1Q04837 148 aaKnown RBP9.67□□□□□ -0.86
LINC00654-201ENST00000379053 CDC20Q12834 499 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 ZXDCQ2QGD7 858 aaPredicted RBP9.67□□□□□ -0.86
LINC00654-201ENST00000379053 SPINK9Q5DT21 86 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 PDZD11Q5EBL8 140 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 OR4S2Q8NH73 311 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 MRPL22Q9NWU5 206 aaKnown RBP9.67□□□□□ -0.86
LINC00654-201ENST00000379053 DOK5Q9P104 306 aa9.67□□□□□ -0.86
LINC00654-201ENST00000379053 C9orf172C9J069 976 aa9.66□□□□□ -0.86
LINC00654-201ENST00000379053 UMAD1C9J7I0 102 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms