RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 A0A1B0GV90 55 aa7.18□□□□□ -1.26
PTPRR-203ENST00000378778 LIPT2A6NK58 231 aa7.18□□□□□ -1.26
PTPRR-203ENST00000378778 TLX3O43711 291 aaPredicted RBP7.18□□□□□ -1.26
PTPRR-203ENST00000378778 DHRS3O75911 302 aa7.18□□□□□ -1.26
PTPRR-203ENST00000378778 SCGB1D2O95969 90 aa7.18□□□□□ -1.26
PTPRR-203ENST00000378778 POU3F1Q03052 451 aaPredicted RBP7.18□□□□□ -1.26
PTPRR-203ENST00000378778 IL24Q13007 206 aa7.18□□□□□ -1.26
PTPRR-203ENST00000378778 Q6ZS49 121 aa7.18□□□□□ -1.26
PTPRR-203ENST00000378778 OR1N1Q8NGS0 311 aa7.18□□□□□ -1.26
PTPRR-203ENST00000378778 CLDND2Q8NHS1 167 aa7.18□□□□□ -1.26
PTPRR-203ENST00000378778 PACRGQ96M98 296 aaPredicted RBP7.18□□□□□ -1.26
PTPRR-203ENST00000378778 OR8D2Q9GZM6 311 aa7.18□□□□□ -1.26
PTPRR-203ENST00000378778 SRD5A3Q9H8P0 318 aa7.18□□□□□ -1.26
PTPRR-203ENST00000378778 LYRM2Q9NU23 88 aaPredicted RBP7.18□□□□□ -1.26
PTPRR-203ENST00000378778 PLEKHJ1Q9NW61 149 aa7.18□□□□□ -1.26
PTPRR-203ENST00000378778 RCL1Q9Y2P8 373 aaKnown RBP7.18□□□□□ -1.26
PTPRR-203ENST00000378778 POLR1DQ9Y2S0 133 aa7.18□□□□□ -1.26
PTPRR-203ENST00000378778 C2orf16Q68DN1 1984 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 CCDC187A0A096LP49 1063 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 VSTM2BA6NLU5 285 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 A8MWP6 167 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 GEMIN2O14893 280 aaKnown RBP7.17□□□□□ -1.26
PTPRR-203ENST00000378778 CYB5BO43169 146 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 CXCL1P09341 107 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 ZNF17P17021 662 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 ATP6V0CP27449 155 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 CCKARP32238 428 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 CAPZBP47756 277 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 CLRN1P58418 232 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 FMODQ06828 376 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 GAMTQ14353 236 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 DEFB115Q30KQ5 88 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.17□□□□□ -1.26
PTPRR-203ENST00000378778 TANGO2Q6ICL3 276 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 ASCL4Q6XD76 172 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 SLC25A26Q70HW3 274 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.17□□□□□ -1.26
PTPRR-203ENST00000378778 COMMD2Q86X83 199 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 PPP1R3BQ86XI6 285 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 UEVLDQ8IX04 471 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 SHISA5Q8N114 240 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 RNF138Q8WVD3 245 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 MRGPRX4Q96LA9 322 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 TMEM56Q96MV1 263 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 PYGO2Q9BRQ0 406 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 AGMATQ9BSE5 352 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 METTL9Q9H1A3 318 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 ZNF286AQ9HBT8 521 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 SLC2A4RGQ9NR83 387 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 SERINC1Q9NRX5 453 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 IL36GQ9NZH8 169 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 VAX2Q9UIW0 290 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 FOXD3Q9UJU5 478 aaPredicted RBP7.17□□□□□ -1.26
PTPRR-203ENST00000378778 CYP8B1Q9UNU6 501 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 MMP24Q9Y5R2 645 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 TMEM56-RWDD3S4R434 201 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 DNAH12Q6ZR08 3092 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 IGKV1-9A0A0C4DH69 117 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 A0A1B0GU03 582 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 TRDCB7Z8K6 153 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 PPP5D1E7EU14 171 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 PHOX2AO14813 284 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 GALR2O43603 387 aaPredicted RBP7.17□□□□□ -1.26
PTPRR-203ENST00000378778 RAMP1O60894 148 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 IFNA1P01562 189 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 SOD3P08294 240 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 TRGC1P0CF51 173 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 PGA4P0DJD7 388 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 SLC25A6P12236 298 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 HLA-DOBP13765 273 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 FASLGP48023 281 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 CCR5P51681 352 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 BIDP55957 195 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 CHAF1BQ13112 559 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 PRDX4Q13162 271 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 ERV3-1Q14264 604 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 HIST3H3Q16695 136 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 DEFB110Q30KQ9 67 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 TMEM196Q5HYL7 178 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 POMZP3Q6PJE2 187 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 SPNS3Q6ZMD2 512 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 TMEM68Q96MH6 324 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 PARD6GQ9BYG4 376 aaPredicted RBP7.17□□□□□ -1.26
PTPRR-203ENST00000378778 GPR61Q9BZJ8 451 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 RTN4RQ9BZR6 473 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 PNRC2Q9NPJ4 139 aaKnown RBP7.17□□□□□ -1.26
PTPRR-203ENST00000378778 ZNF701Q9NV72 531 aaPredicted RBP7.17□□□□□ -1.26
PTPRR-203ENST00000378778 ZNF391Q9UJN7 358 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 ZDHHC8Q9ULC8 765 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 SLCO1B1Q9Y6L6 691 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 ADAMTS9Q9P2N4 1935 aa7.17□□□□□ -1.26
PTPRR-203ENST00000378778 IGLV3-32A0A0A0MS00 114 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 M0QZK8 103 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 GGCTO75223 188 aaKnown RBP7.16□□□□□ -1.26
PTPRR-203ENST00000378778 HOXB2P14652 356 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 IL2RGP31785 369 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 NKX2-1P43699 371 aaPredicted RBP7.16□□□□□ -1.26
PTPRR-203ENST00000378778 PDLIM4P50479 330 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 ERVFRD-1P60508 538 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 VAMP2P63027 116 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms