RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 BCL3P20749 454 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 RBP2P50120 134 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 MTCP1P56278 107 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 CNN3Q15417 329 aaKnown RBP12.59□□□□□ -0.39
RAB4B-202ENST00000378307 OGFRL1Q5TC84 451 aaPredicted RBP12.59□□□□□ -0.39
RAB4B-202ENST00000378307 OR2G6Q5TZ20 316 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 TMEM200BQ69YZ2 307 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 C16orf87Q6PH81 154 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 C1orf122Q6ZSJ8 110 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 EGFL6Q8IUX8 553 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 CMTM4Q8IZR5 234 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 FAM185AQ8N0U4 392 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 PACRGLQ8N7B6 248 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 DNAAF1Q8NEP3 725 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 OR13C3Q8NGS6 347 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 OR13C9Q8NGT0 318 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 RGP1Q92546 391 aaPredicted RBP12.59□□□□□ -0.39
RAB4B-202ENST00000378307 JAM3Q9BX67 310 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 CHIAQ9BZP6 476 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 ZMAT3Q9HA38 289 aaKnown RBP12.59□□□□□ -0.39
RAB4B-202ENST00000378307 NOX4Q9NPH5 578 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 RBFOX1Q9NWB1 397 aaKnown RBP12.59□□□□□ -0.39
RAB4B-202ENST00000378307 CLEC2DQ9UHP7 191 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 SIRT4Q9Y6E7 314 aaPredicted RBP12.59□□□□□ -0.39
RAB4B-202ENST00000378307 TRBV23-1A0A0A0MS06 115 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 TMEM82A0PJX8 343 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 MEX3AA1L020 520 aaKnown RBP12.58□□□□□ -0.4
RAB4B-202ENST00000378307 K7N7A8 449 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 HAX1O00165 279 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 SLC1A7O00341 560 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 CASQ2O14958 399 aaPredicted RBP12.58□□□□□ -0.4
RAB4B-202ENST00000378307 ANGPTL7O43827 346 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 LALBAP00709 142 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 IGHV4-59P01825 116 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 CCL3L1P16619 93 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 POU3F4P49335 361 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 ATP1B3P54709 279 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 RPL31P62899 125 aaKnown RBP12.58□□□□□ -0.4
RAB4B-202ENST00000378307 ZNF273Q14593 569 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 ASPHD2Q6ICH7 369 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 DHRSXQ8N5I4 330 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 C17orf50Q8WW18 174 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 MRPL48Q96GC5 212 aaKnown RBP12.58□□□□□ -0.4
RAB4B-202ENST00000378307 OPALINQ96PE5 141 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 UNKLQ9H9P5 680 aaKnown RBP12.58□□□□□ -0.4
RAB4B-202ENST00000378307 NKX1-2Q9UD57 310 aaPredicted RBP12.58□□□□□ -0.4
RAB4B-202ENST00000378307 TRRAPQ9Y4A5 3859 aa12.58□□□□□ -0.4
RAB4B-202ENST00000378307 FAM181BA6NEQ2 426 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 PIPP12273 146 aaPredicted RBP12.57□□□□□ -0.4
RAB4B-202ENST00000378307 OMGP23515 440 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 DUSP1P28562 367 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 GBX2P52951 348 aaPredicted RBP12.57□□□□□ -0.4
RAB4B-202ENST00000378307 PDZK1IP1Q13113 114 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 TTC23Q5W5X9 447 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 FIP1L1Q6UN15 594 aaKnown RBP12.57□□□□□ -0.4
RAB4B-202ENST00000378307 C17orf107Q6ZR85 190 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 MKXQ8IYA7 352 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 ASCC1Q8N9N2 400 aaKnown RBP12.57□□□□□ -0.4
RAB4B-202ENST00000378307 OR52N4Q8NGI2 321 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 OR5D18Q8NGL1 313 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 OR5AK2Q8NH90 309 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 GGHQ92820 318 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 EMG1Q92979 244 aaKnown RBP12.57□□□□□ -0.4
RAB4B-202ENST00000378307 SPSB1Q96BD6 273 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 AJUBAQ96IF1 538 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 ZCCHC4Q9H5U6 513 aa12.57□□□□□ -0.4
RAB4B-202ENST00000378307 METTL8Q9H825 291 aaKnown RBP12.57□□□□□ -0.4
RAB4B-202ENST00000378307 TRBV2A0A0J9YWF9 115 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 TMEM212A6NML5 194 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 H0YAE9 185 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 NPFFO15130 113 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 PRKACBP22694 351 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 PAX6P26367 422 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 DCKP27707 260 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 SAA4P35542 130 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 IER3P46695 156 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 UBE2E1P51965 193 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 SNU13P55769 128 aaKnown RBP12.56□□□□□ -0.4
RAB4B-202ENST00000378307 DLX6P56179 175 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 RELBQ01201 579 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 DOC2BQ14184 412 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 LHFPL2Q6ZUX7 228 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 FAM58AQ8N1B3 248 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 PARP16Q8N5Y8 322 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 C3orf56Q8N813 242 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 RPS4Y2Q8TD47 263 aa12.56□□□□□ -0.4
RAB4B-202ENST00000378307 DIMT1Q9UNQ2 313 aaKnown RBP12.56□□□□□ -0.4
RAB4B-202ENST00000378307 CAB39Q9Y376 341 aaPredicted RBP12.56□□□□□ -0.4
RAB4B-202ENST00000378307 KIAA2026Q5HYC2 2103 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 MEIOCA2RUB1 952 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 PSPNO60542 156 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 HAND1O96004 215 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 MT-ND2P03891 347 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 CHRM2P08172 466 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 CCDC159P0C7I6 412 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 MDKP21741 143 aaPredicted RBP12.55□□□□□ -0.4
RAB4B-202ENST00000378307 CAPGP40121 348 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 SOX2P48431 317 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 FOXL1Q12952 345 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 MRPL28Q13084 256 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms