RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 EFNB2P52799 333 aa17.86■□□□□ 0.45
CBWD3-202ENST00000377342 FGF12P61328 243 aa17.86■□□□□ 0.45
CBWD3-202ENST00000377342 CNPY1Q3B7I2 92 aa17.86■□□□□ 0.45
CBWD3-202ENST00000377342 OR2W3Q7Z3T1 314 aa17.86■□□□□ 0.45
CBWD3-202ENST00000377342 C1orf87Q8N0U7 546 aa17.86■□□□□ 0.45
CBWD3-202ENST00000377342 FAM58AQ8N1B3 248 aa17.86■□□□□ 0.45
CBWD3-202ENST00000377342 KCTD12Q96CX2 325 aaKnown RBP17.86■□□□□ 0.45
CBWD3-202ENST00000377342 BANF2Q9H503 90 aa17.86■□□□□ 0.45
CBWD3-202ENST00000377342 MAP1AP78559 2803 aaPredicted RBP17.85■□□□□ 0.45
CBWD3-202ENST00000377342 IGHV3OR15-7A0A075B7D8 119 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 CLDN25C9JDP6 229 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 ZNF780AO75290 641 aaPredicted RBP17.85■□□□□ 0.45
CBWD3-202ENST00000377342 MGMTP16455 207 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 PRKACAP17612 351 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 SOX6P35712 828 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 ZMYND11Q15326 602 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 PIGYQ3MUY2 71 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 TEX36Q5VZQ5 186 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 SFRP4Q6FHJ7 346 aaPredicted RBP17.85■□□□□ 0.45
CBWD3-202ENST00000377342 DNM1P46Q6ZS02 220 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 BIVMQ86UB2 503 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 SLC25A38Q96DW6 304 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 CST11Q9H112 138 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 RHOFQ9HBH0 211 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 MYOZ1Q9NP98 299 aaPredicted RBP17.85■□□□□ 0.45
CBWD3-202ENST00000377342 ABRACLQ9P1F3 81 aa17.85■□□□□ 0.45
CBWD3-202ENST00000377342 VPS13CQ709C8 3753 aa17.84■□□□□ 0.45
CBWD3-202ENST00000377342 PRRC2AP48634 2157 aaKnown RBP17.84■□□□□ 0.45
CBWD3-202ENST00000377342 OOEPA6NGQ2 149 aa17.84■□□□□ 0.45
CBWD3-202ENST00000377342 CRTAPO75718 401 aaPredicted RBP17.84■□□□□ 0.45
CBWD3-202ENST00000377342 IGHV2-70P01814 119 aa17.84■□□□□ 0.45
CBWD3-202ENST00000377342 SCAND1P57086 179 aa17.84■□□□□ 0.45
CBWD3-202ENST00000377342 SMIM21Q3B7S5 101 aa17.84■□□□□ 0.45
CBWD3-202ENST00000377342 FAM90A1Q86YD7 464 aa17.84■□□□□ 0.45
CBWD3-202ENST00000377342 LRRC75A-AS1Q8N1F1 130 aa17.84■□□□□ 0.45
CBWD3-202ENST00000377342 OR51T1Q8NGJ9 327 aa17.84■□□□□ 0.45
CBWD3-202ENST00000377342 NXF2Q9GZY0 626 aaKnown RBP17.84■□□□□ 0.45
CBWD3-202ENST00000377342 RASL12Q9NYN1 266 aa17.84■□□□□ 0.45
CBWD3-202ENST00000377342 ZNF581Q9P0T4 197 aa17.84■□□□□ 0.45
CBWD3-202ENST00000377342 LGALS8O00214 317 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 MPIG6BO95866 241 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 CSTBP04080 98 aaKnown RBP17.83■□□□□ 0.45
CBWD3-202ENST00000377342 TFF1P04155 84 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 SNU13P55769 128 aaKnown RBP17.83■□□□□ 0.45
CBWD3-202ENST00000377342 RBM11P57052 281 aaKnown RBP17.83■□□□□ 0.45
CBWD3-202ENST00000377342 BTG1P62324 171 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 GPR176Q14439 515 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 CARTPTQ16568 116 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 NHLRC3Q5JS37 347 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 METAP1DQ6UB28 335 aaPredicted RBP17.83■□□□□ 0.45
CBWD3-202ENST00000377342 OSR2Q8N2R0 312 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 KCNG3Q8TAE7 436 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 Q96M66 194 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 MRI1Q9BV20 369 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 TMEM59Q9BXS4 323 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 NLKQ9UBE8 527 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 SPATA2Q9UM82 520 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 WIPI2Q9Y4P8 454 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 ETV7Q9Y603 341 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 NOTCH2Q04721 2471 aa17.83■□□□□ 0.45
CBWD3-202ENST00000377342 PPIAL4EA0A075B759 164 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 PPIAL4DF5H284 164 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 PPIAL4FP0DN26 164 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 GTF2F2P13984 249 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 GIFP27352 417 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 CAPZA1P52907 286 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 RPS27AP62979 156 aaKnown RBP17.83■□□□□ 0.44
CBWD3-202ENST00000377342 AVPI1Q5T686 147 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 STUMQ69YW2 141 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 KRTAP1-3Q8IUG1 177 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 AP3S1Q92572 193 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 NICN1Q9BSH3 213 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 LPAR5Q9H1C0 372 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 ZNF222Q9UK12 451 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 PPIAL4AQ9Y536 164 aa17.83■□□□□ 0.44
CBWD3-202ENST00000377342 SETXQ7Z333 2677 aaKnown RBP17.82■□□□□ 0.44
CBWD3-202ENST00000377342 IGKV1D-17A0A075B6S4 117 aa17.82■□□□□ 0.44
CBWD3-202ENST00000377342 A0A0A6YYD4 124 aa17.82■□□□□ 0.44
CBWD3-202ENST00000377342 PPIHO43447 177 aaKnown RBP17.82■□□□□ 0.44
CBWD3-202ENST00000377342 KNG1P01042 644 aa17.82■□□□□ 0.44
CBWD3-202ENST00000377342 CEBPDP49716 269 aaPredicted RBP17.82■□□□□ 0.44
CBWD3-202ENST00000377342 DYNC1I2Q13409 638 aaKnown RBP17.82■□□□□ 0.44
CBWD3-202ENST00000377342 ACOT12Q8WYK0 555 aa17.82■□□□□ 0.44
CBWD3-202ENST00000377342 MRPS24Q96EL2 167 aaKnown RBP17.82■□□□□ 0.44
CBWD3-202ENST00000377342 TM2D1Q9BX74 207 aa17.82■□□□□ 0.44
CBWD3-202ENST00000377342 SELENOIQ9C0D9 397 aa17.82■□□□□ 0.44
CBWD3-202ENST00000377342 DNAJB11Q9UBS4 358 aa17.82■□□□□ 0.44
CBWD3-202ENST00000377342 ST3GAL6Q9Y274 331 aa17.82■□□□□ 0.44
CBWD3-202ENST00000377342 FSTL3O95633 263 aa17.81■□□□□ 0.44
CBWD3-202ENST00000377342 PSG2P11465 335 aa17.81■□□□□ 0.44
CBWD3-202ENST00000377342 AMY2BP19961 511 aa17.81■□□□□ 0.44
CBWD3-202ENST00000377342 RAB6AP20340 208 aa17.81■□□□□ 0.44
CBWD3-202ENST00000377342 DUSP1P28562 367 aa17.81■□□□□ 0.44
CBWD3-202ENST00000377342 PDLIM4P50479 330 aa17.81■□□□□ 0.44
CBWD3-202ENST00000377342 BMXP51813 675 aa17.81■□□□□ 0.44
CBWD3-202ENST00000377342 TMEM33P57088 247 aa17.81■□□□□ 0.44
CBWD3-202ENST00000377342 ZNF146Q15072 292 aa17.81■□□□□ 0.44
CBWD3-202ENST00000377342 ZNF404Q494X3 552 aa17.81■□□□□ 0.44
CBWD3-202ENST00000377342 DEFB108BQ8NET1 73 aa17.81■□□□□ 0.44
CBWD3-202ENST00000377342 OR5T2Q8NGG2 359 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms