RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 PINX1Q96BK5 328 aaKnown RBP13.65□□□□□ -0.22
FXN-201ENST00000377270 RASD2Q96D21 266 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 PHF7Q9BWX1 381 aaPredicted RBP13.65□□□□□ -0.22
FXN-201ENST00000377270 TAF9BQ9HBM6 251 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 A0A087WWC5 75 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 TRBV6-7A0A0A0MS04 114 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 FITM1A5D6W6 292 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 TVP23AA6NH52 213 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 ZNF354AO60765 605 aaPredicted RBP13.65□□□□□ -0.22
FXN-201ENST00000377270 PPICP45877 212 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 MMDQ15546 238 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 CBLN3Q6UW01 205 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 C17orf82Q86X59 251 aaPredicted RBP13.65□□□□□ -0.22
FXN-201ENST00000377270 ZPLD1Q8TCW7 415 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 TMEM18Q96B42 140 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 NXF5Q9H1B4 397 aaKnown RBP13.65□□□□□ -0.22
FXN-201ENST00000377270 HSPB7Q9UBY9 170 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 OSGIN2Q9Y236 505 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 SEC16AO15027 2179 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 IGKV1D-42A0A075B6H8 117 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 TRAV39A0A0B4J263 110 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 LMO7DNF2Z398 122 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 XKRYO14609 159 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 NME2P1O60361 137 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 ZNF735P0CB33 412 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 H3F3AP84243 136 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 WBP2NLQ6ICG8 309 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 SLC25A42Q86VD7 318 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 OR6K6Q8NGW6 343 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 RNF166Q96A37 237 aaPredicted RBP13.64□□□□□ -0.23
FXN-201ENST00000377270 TBX15Q96SF7 602 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 C20orf144Q9BQM9 153 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 ZNF701Q9NV72 531 aaPredicted RBP13.64□□□□□ -0.23
FXN-201ENST00000377270 RAB22AQ9UL26 194 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 SDK1Q7Z5N4 2213 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 A0A0C4DFX4 3053 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 TMEM150CB9EJG8 249 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 CDC40O60508 579 aaKnown RBP eCLIP13.64□□□□□ -0.23
FXN-201ENST00000377270 GRK6P43250 576 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 RAB11BQ15907 218 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 RPL7L1Q6DKI1 246 aaKnown RBP13.64□□□□□ -0.23
FXN-201ENST00000377270 AWAT2Q6E213 333 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 H1FOOQ8IZA3 346 aaPredicted RBP13.64□□□□□ -0.23
FXN-201ENST00000377270 KDM8Q8N371 416 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 OR4X1Q8NH49 305 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 OR5AK2Q8NH90 309 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 SEH1LQ96EE3 360 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 CIB3Q96Q77 187 aaPredicted RBP13.64□□□□□ -0.23
FXN-201ENST00000377270 CACNA1IQ9P0X4 2223 aa13.64□□□□□ -0.23
FXN-201ENST00000377270 TRAV8-7A0A075B6U6 113 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 H3BQ15 152 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 ARPC3O15145 178 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 UTS2O95399 124 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 IL2RAP01589 272 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 LMO1P25800 156 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 OR1D5P58170 312 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 SELENOVP59797 346 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 PPP1R1AQ13522 171 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 TDRG1Q3Y452 100 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 KLHL24Q6TFL4 600 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 PRR22Q8IZ63 422 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 SUMF2Q8NBJ7 301 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 MFSD8Q8NHS3 518 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 MCHR2Q969V1 340 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 Q96M85 177 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 SLC6A7Q99884 636 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 RNF126Q9BV68 326 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 COLQQ9Y215 455 aaPredicted RBP13.63□□□□□ -0.23
FXN-201ENST00000377270 VSIG4Q9Y279 399 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 RNF115Q9Y4L5 304 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 ABCA7Q8IZY2 2146 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 TRBV5-5A0A0J9YX44 114 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 EIF1AYO14602 144 aaKnown RBP13.63□□□□□ -0.23
FXN-201ENST00000377270 NUDT21O43809 227 aaKnown RBP13.63□□□□□ -0.23
FXN-201ENST00000377270 PNMTP11086 282 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 EIF1AXP47813 144 aaKnown RBP13.63□□□□□ -0.23
FXN-201ENST00000377270 ARL4DP49703 201 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 CLDN18P56856 261 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 ARF6P62330 175 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 FNDC7Q5VTL7 733 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 ATG4DQ86TL0 474 aaPredicted RBP13.63□□□□□ -0.23
FXN-201ENST00000377270 ZNF738Q8NE65 137 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 CCDC74AQ96AQ1 378 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 SLC46A1Q96NT5 459 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 ADOQ96SZ5 270 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 GPR35Q9HC97 309 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 SLC17A5Q9NRA2 495 aa13.63□□□□□ -0.23
FXN-201ENST00000377270 C5orf51A6NDU8 294 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 C4orf47A7E2U8 309 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 CCKARP32238 428 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 RPS4XP62701 263 aaKnown RBP13.62□□□□□ -0.23
FXN-201ENST00000377270 IL13RA1P78552 427 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 COL10A1Q03692 680 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 EBPQ15125 230 aaKnown RBP13.62□□□□□ -0.23
FXN-201ENST00000377270 LEG1Q6P5S2 330 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 SLC25A26Q70HW3 274 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 ZNF101Q8IZC7 436 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 OR4D5Q8NGN0 318 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 ZNF417Q8TAU3 575 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 CNTNAP3Q9BZ76 1288 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms