RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 CLDN34H7C241 214 aa18.22■□□□□ 0.51
SRM-201ENST00000376957 FCN3O75636 299 aa18.22■□□□□ 0.51
SRM-201ENST00000376957 MT-ND2P03891 347 aa18.22■□□□□ 0.51
SRM-201ENST00000376957 LIMS3P0CW19 117 aa18.22■□□□□ 0.51
SRM-201ENST00000376957 LIMS4P0CW20 117 aa18.22■□□□□ 0.51
SRM-201ENST00000376957 POU3F4P49335 361 aa18.22■□□□□ 0.51
SRM-201ENST00000376957 SLC34A1Q06495 639 aa18.22■□□□□ 0.51
SRM-201ENST00000376957 FAM185AQ8N0U4 392 aa18.22■□□□□ 0.51
SRM-201ENST00000376957 FGFRL1Q8N441 504 aa18.22■□□□□ 0.51
SRM-201ENST00000376957 OR5D13Q8NGL4 314 aa18.22■□□□□ 0.51
SRM-201ENST00000376957 EMG1Q92979 244 aaKnown RBP18.22■□□□□ 0.51
SRM-201ENST00000376957 RHOFQ9HBH0 211 aa18.22■□□□□ 0.51
SRM-201ENST00000376957 MTCH1Q9NZJ7 389 aa18.22■□□□□ 0.51
SRM-201ENST00000376957 DNAJC9-AS1A6NH13 148 aa18.21■□□□□ 0.51
SRM-201ENST00000376957 HCKP08631 526 aa18.21■□□□□ 0.51
SRM-201ENST00000376957 RPL31P62899 125 aaKnown RBP18.21■□□□□ 0.51
SRM-201ENST00000376957 TUSC1Q2TAM9 212 aa18.21■□□□□ 0.51
SRM-201ENST00000376957 CD177Q8N6Q3 437 aa18.21■□□□□ 0.51
SRM-201ENST00000376957 ASCC1Q8N9N2 400 aaKnown RBP18.21■□□□□ 0.51
SRM-201ENST00000376957 ZSCAN4Q8NAM6 433 aaPredicted RBP18.21■□□□□ 0.51
SRM-201ENST00000376957 OR51A4Q8NGJ6 313 aa18.21■□□□□ 0.51
SRM-201ENST00000376957 OR13C9Q8NGT0 318 aa18.21■□□□□ 0.51
SRM-201ENST00000376957 GPR148Q8TDV2 347 aa18.21■□□□□ 0.51
SRM-201ENST00000376957 PDCD1LG2Q9BQ51 273 aa18.21■□□□□ 0.51
SRM-201ENST00000376957 ZNF649Q9BS31 505 aa18.21■□□□□ 0.51
SRM-201ENST00000376957 VCX3BQ9H321 246 aa18.21■□□□□ 0.51
SRM-201ENST00000376957 ESM1Q9NQ30 184 aa18.21■□□□□ 0.51
SRM-201ENST00000376957 BABAM2Q9NXR7 383 aa18.21■□□□□ 0.51
SRM-201ENST00000376957 IGKV1-27A0A075B6S5 117 aa18.2■□□□□ 0.5
SRM-201ENST00000376957 SULT1B1O43704 296 aa18.2■□□□□ 0.5
SRM-201ENST00000376957 INMTO95050 263 aa18.2■□□□□ 0.5
SRM-201ENST00000376957 ALX3O95076 343 aa18.2■□□□□ 0.5
SRM-201ENST00000376957 TFF1P04155 84 aa18.2■□□□□ 0.5
SRM-201ENST00000376957 TK1P04183 234 aa18.2■□□□□ 0.5
SRM-201ENST00000376957 ETV1P50549 477 aa18.2■□□□□ 0.5
SRM-201ENST00000376957 GDPD3Q7L5L3 318 aa18.2■□□□□ 0.5
SRM-201ENST00000376957 BATF2Q8N1L9 274 aa18.2■□□□□ 0.5
SRM-201ENST00000376957 PARP16Q8N5Y8 322 aa18.2■□□□□ 0.5
SRM-201ENST00000376957 PPP1R35Q8TAP8 253 aa18.2■□□□□ 0.5
SRM-201ENST00000376957 CNOT2Q9NZN8 540 aaKnown RBP18.2■□□□□ 0.5
SRM-201ENST00000376957 IGKV1-9A0A0C4DH69 117 aa18.19■□□□□ 0.5
SRM-201ENST00000376957 PIPP12273 146 aaPredicted RBP18.19■□□□□ 0.5
SRM-201ENST00000376957 RAB3AP20336 220 aa18.19■□□□□ 0.5
SRM-201ENST00000376957 FOXL1Q12952 345 aa18.19■□□□□ 0.5
SRM-201ENST00000376957 PDZK1IP1Q13113 114 aa18.19■□□□□ 0.5
SRM-201ENST00000376957 DEFB112Q30KQ8 113 aa18.19■□□□□ 0.5
SRM-201ENST00000376957 SPIN3Q5JUX0 258 aa18.19■□□□□ 0.5
SRM-201ENST00000376957 FAM58AQ8N1B3 248 aa18.19■□□□□ 0.5
SRM-201ENST00000376957 STX19Q8N4C7 294 aa18.19■□□□□ 0.5
SRM-201ENST00000376957 OR52N1Q8NH53 320 aa18.19■□□□□ 0.5
SRM-201ENST00000376957 ZNF48Q96MX3 618 aaPredicted RBP18.19■□□□□ 0.5
SRM-201ENST00000376957 PRDM13Q9H4Q3 707 aa18.19■□□□□ 0.5
SRM-201ENST00000376957 SEBOXQ9HB31 216 aaPredicted RBP18.19■□□□□ 0.5
SRM-201ENST00000376957 SIRT7Q9NRC8 400 aa18.19■□□□□ 0.5
SRM-201ENST00000376957 TMEM89A2RUT3 159 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 E9PI62 339 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 H0YHG0 523 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 K7N7A8 449 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 HAX1O00165 279 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 CRYBA1P05813 215 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 RNASE1P07998 156 aaKnown RBP18.18■□□□□ 0.5
SRM-201ENST00000376957 TAS2R43P59537 309 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 ST3GAL4Q11206 333 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 CDK5R1Q15078 307 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 SLC9A3R2Q15599 337 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 RUSC1-AS1Q66K80 236 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 Q6YL49 198 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 SAXO1Q8IYX7 474 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 OR10AC1Q8NH08 325 aa18.18■□□□□ 0.5
SRM-201ENST00000376957 ELL3Q9HB65 397 aaPredicted RBP18.18■□□□□ 0.5
SRM-201ENST00000376957 SF3B6Q9Y3B4 125 aaKnown RBP18.18■□□□□ 0.5
SRM-201ENST00000376957 H0YJX3 145 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 SH2D1BO14796 132 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 HOXA3O43365 443 aaPredicted RBP18.17■□□□□ 0.5
SRM-201ENST00000376957 PAHP00439 452 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 CEBPDP49716 269 aaPredicted RBP18.17■□□□□ 0.5
SRM-201ENST00000376957 BMXP51813 675 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 GTF2A1P52655 376 aaPredicted RBP18.17■□□□□ 0.5
SRM-201ENST00000376957 COL10A1Q03692 680 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 OR2G6Q5TZ20 316 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 PDZD9Q8IXQ8 264 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 TMEM86BQ8N661 226 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 C3orf56Q8N813 242 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 SSMEM1Q8WWF3 244 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 GGHQ92820 318 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 SNX22Q96L94 193 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 DUX5Q96PT3 197 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 GPER1Q99527 375 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 HEXA-AS1Q9H8Q6 139 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 UNKLQ9H9P5 680 aaKnown RBP18.17■□□□□ 0.5
SRM-201ENST00000376957 PLCXD1Q9NUJ7 323 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 POMT1Q9Y6A1 747 aa18.17■□□□□ 0.5
SRM-201ENST00000376957 BTBD17A6NE02 478 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 ERICH4A6NGS2 130 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 MYL12BO14950 172 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 SPRY1O43609 319 aaPredicted RBP18.16■□□□□ 0.5
SRM-201ENST00000376957 HAND1O96004 215 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 FBP1P09467 338 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 TMEM225BP0DP42 221 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 PRKACAP17612 351 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms