RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 SPTSSAQ969W0 71 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 MSI2Q96DH6 328 aaKnown RBP8.28□□□□□ -1.08
TRIM39-202ENST00000376659 RSRP1Q9BUV0 290 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 DNAJB11Q9UBS4 358 aa8.28□□□□□ -1.08
TRIM39-202ENST00000376659 C9J4A7 227 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 DUSP3P51452 185 aaPredicted RBP8.27□□□□□ -1.09
TRIM39-202ENST00000376659 PRSS12P56730 875 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 RAB32Q13637 225 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 FAM189A2Q15884 450 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 SWI5Q1ZZU3 235 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 WIPI1Q5MNZ9 446 aaPredicted RBP8.27□□□□□ -1.09
TRIM39-202ENST00000376659 ELP2Q6IA86 826 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 RTL6Q6ICC9 239 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 LHFPL2Q6ZUX7 228 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 C2orf50Q96LR7 162 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 FOXB1Q99853 325 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 RBM24Q9BX46 236 aaKnown RBP8.27□□□□□ -1.09
TRIM39-202ENST00000376659 RNF122Q9H9V4 155 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 CXCL13O43927 109 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 AMY2BP19961 511 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 ECI1P42126 302 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 RGS19P49795 217 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 SLC9A3R2Q15599 337 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 TCEAL6Q6IPX3 200 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 AKR7LQ8NHP1 331 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 TCEAL3Q969E4 200 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 FAAP24Q9BTP7 215 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 RGCCQ9H4X1 137 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 EHFQ9NZC4 300 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 MLXQ9UH92 298 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 LOXL2Q9Y4K0 774 aa8.27□□□□□ -1.09
TRIM39-202ENST00000376659 KANTRA0A1W2PQU2 76 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 GEMIN2O14893 280 aaKnown RBP8.26□□□□□ -1.09
TRIM39-202ENST00000376659 SNAPINO95295 136 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 FOXG1P55316 489 aaPredicted RBP8.26□□□□□ -1.09
TRIM39-202ENST00000376659 RBM11P57052 281 aaKnown RBP8.26□□□□□ -1.09
TRIM39-202ENST00000376659 CARD18P57730 90 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 PDZK1IP1Q13113 114 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 ZNF169Q14929 603 aaPredicted RBP8.26□□□□□ -1.09
TRIM39-202ENST00000376659 PABPC1L2AQ5JQF8 200 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 CASTOR1Q8WTX7 329 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 POM121Q96HA1 1249 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 CDC6Q99741 560 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 ST6GALNAC5Q9BVH7 336 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 BCO1Q9HAY6 547 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 PLEK2Q9NYT0 353 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 ESPL1Q14674 2120 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 FAM74A7A6NL05 159 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 EEF1E1-BLOC1S5C9J1V9 151 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 ABCD4O14678 606 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 ANGPTL7O43827 346 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 NAPSAO96009 420 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 STARP49675 285 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 UCP3P55916 312 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 FAM74A3Q4VXF1 159 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 CYB5R2Q6BCY4 276 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 BTNL8Q6UX41 500 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 UNQ6126/PRO20091Q6UXV3 157 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 KCTD9Q7L273 389 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 COMMD2Q86X83 199 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 OR2M7Q8NG81 312 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 BSCL2Q96G97 398 aaPredicted RBP8.26□□□□□ -1.09
TRIM39-202ENST00000376659 REPIN1Q9BWE0 567 aaKnown RBP8.26□□□□□ -1.09
TRIM39-202ENST00000376659 GP6Q9HCN6 339 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 LHX6Q9UPM6 363 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 KLF2Q9Y5W3 355 aaPredicted RBP8.26□□□□□ -1.09
TRIM39-202ENST00000376659 CHD3Q12873 2000 aaKnown RBP8.26□□□□□ -1.09
TRIM39-202ENST00000376659 CD59P13987 128 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 VAMP1P23763 118 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 HERPUD1Q15011 391 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 TSC22D1Q15714 1073 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 CEACAM16Q2WEN9 425 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 PLEKHN1Q494U1 663 aaPredicted RBP8.26□□□□□ -1.09
TRIM39-202ENST00000376659 C6orf15Q6UXA7 325 aaPredicted RBP8.26□□□□□ -1.09
TRIM39-202ENST00000376659 GALNTL5Q7Z4T8 443 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 MDS2Q8NDY4 140 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 OR4D5Q8NGN0 318 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 DCUN1D4Q92564 292 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 CPNE4Q96A23 557 aaPredicted RBP8.26□□□□□ -1.09
TRIM39-202ENST00000376659 MOB3AQ96BX8 217 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 NECAB3Q96P71 396 aaPredicted RBP8.26□□□□□ -1.09
TRIM39-202ENST00000376659 HES7Q9BYE0 225 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 PRRG4Q9BZD6 226 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 GLS2Q9UI32 602 aa8.26□□□□□ -1.09
TRIM39-202ENST00000376659 RRADP55042 308 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 RNPS1Q15287 305 aaKnown RBP8.25□□□□□ -1.09
TRIM39-202ENST00000376659 TSPO2Q5TGU0 170 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 OR2A2Q6IF42 318 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 ZNF880Q6PDB4 577 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 CSNK2A3Q8NEV1 391 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 PLPPR1Q8TBJ4 325 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 CNTNAP3BQ96NU0 1288 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 ZNF2Q9BSG1 426 aaPredicted RBP8.25□□□□□ -1.09
TRIM39-202ENST00000376659 CNTNAP3Q9BZ76 1288 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 PIGMQ9H3S5 423 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 GSN-AS1Q9NRJ2 163 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 TRIOBPQ9H2D6 2365 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 H7C1Q1 480 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 CDX4O14627 284 aaPredicted RBP8.25□□□□□ -1.09
TRIM39-202ENST00000376659 HTR3BO95264 441 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms