RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	CEBPG	P53567	150 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	NKX6-1	P78426	367 aa	Predicted RBP	11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	IL13RA1	P78552	427 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	GABRA6	Q16445	453 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	SLC25A53	Q5H9E4	307 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	AADACL3	Q5VUY0	350 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	GDPD1	Q8N9F7	314 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	NARS2	Q96I59	477 aa	Known RBP	11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	CCDC59	Q9P031	241 aa	Known RBP	11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	ONECUT1	Q9UBC0	465 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	IGLV3-32	A0A0A0MS00	114 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	ZNF724	A8MTY0	619 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	CALCR	P30988	508 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	H3F3A	P84243	136 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	PSG7	Q13046	419 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	IRF3	Q14653	427 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	RIPPLY2	Q5TAB7	128 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	METTL11B	Q5VVY1	283 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	LHFPL2	Q6ZUX7	228 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	LEAP2	Q969E1	77 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	KCNIP3	Q9Y2W7	256 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	LSM5	Q9Y4Y9	91 aa	Known RBP	11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	CFAP47	Q6ZTR5	3102 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	MEIOC	A2RUB1	952 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	C10orf142	B7Z368	130 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	HLA-A	P01891	365 aa	Known RBP	11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	AKAIN1	P0CW23	69 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	SMCO1	Q147U7	214 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	GTF3A	Q92664	365 aa	Known RBP	11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	SFXN3	Q9BWM7	321 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	FAM206A	Q9NX38	181 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	ONECUT2	O95948	504 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	CD40	P25942	277 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	FCGR2C	P31995	323 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	FAM3A	P98173	230 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	MUC15	Q8N387	334 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	BCL2L2	Q92843	193 aa	Predicted RBP	11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	CLEC4M	Q9H2X3	399 aa	Predicted RBP	11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	PURG	Q9UJV8	347 aa	Known RBP	11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	LSM2	Q9Y333	95 aa	Known RBP	11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	IFNA21	P01568	189 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	VSIG8	P0DPA2	414 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	DDOST	P39656	456 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	PLA2G5	P39877	138 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	FHL1	Q13642	323 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	SCMH1	Q96GD3	660 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	G6PC2	Q9NQR9	355 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	SMAD7	O15105	426 aa	Known RBP	11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	TNFRSF1A	P19438	455 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	SERPINF1	P36955	418 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	CCR9	P51686	369 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	GPR176	Q14439	515 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	ABLIM2	Q6H8Q1	611 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	CALHM1	Q8IU99	346 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	RRNAD1	Q96FB5	475 aa	Known RBP	11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	ZNF221	Q9UK13	617 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	WASF3	Q9UPY6	502 aa		11.66	□□□□□ -0.54
DDR1-225	ENST00000376568	ZNF503-AS2	A6NEH8	195 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	GOSR2	O14653	212 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	OPN1MW	P04001	364 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	OPN1MW2	P0DN77	364 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	OPN1MW3	P0DN78	364 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	GAA	P10253	952 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	COX6B1	P14854	86 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	LGALS4	P56470	323 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	ZNRF1	Q8ND25	227 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	MAPK1IP1L	Q8NDC0	245 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	OR10R2	Q8NGX6	335 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	MARCH1	Q8TCQ1	289 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	TMEM54	Q969K7	222 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	SMIM3	Q9BZL3	60 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	RBM38	Q9H0Z9	239 aa	Known RBP	11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	AMDHD2	Q9Y303	409 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	SMCO3	A2RU48	225 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	OR3A1	P47881	315 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	REG1B	P48304	166 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	BDH1	Q02338	343 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	TATDN3	Q17R31	274 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	TMEM255A	Q5JRV8	349 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	OR52B4	Q8NGK2	314 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	OCSTAMP	Q9BR26	566 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	TMA7	Q9Y2S6	64 aa	Known RBP	11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	HMX3	A6NHT5	357 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568		A8MXE2	369 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	FAM157A	C9JC47	383 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	SLC22A5	O76082	557 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	RPS2	P15880	293 aa	Known RBP	11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	CBR1	P16152	277 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	C5orf24	Q7Z6I8	188 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	RNF115	Q9Y4L5	304 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	HSPB11	Q9Y547	144 aa		11.65	□□□□□ -0.54
DDR1-225	ENST00000376568	PHF1	O43189	567 aa	Predicted RBP	11.64	□□□□□ -0.55
DDR1-225	ENST00000376568	GLS	O94925	669 aa	Predicted RBP	11.64	□□□□□ -0.55
DDR1-225	ENST00000376568	CSF3	P09919	207 aa		11.64	□□□□□ -0.55
DDR1-225	ENST00000376568	APELA	P0DMC3	54 aa		11.64	□□□□□ -0.55
DDR1-225	ENST00000376568	BAIAP2L2	Q6UXY1	529 aa		11.64	□□□□□ -0.55
DDR1-225	ENST00000376568	PCNP	Q8WW12	178 aa	Known RBP	11.64	□□□□□ -0.55
DDR1-225	ENST00000376568	FAM215A	Q9Y5M1	114 aa		11.64	□□□□□ -0.55
DDR1-225	ENST00000376568	ZNF780A	O75290	641 aa	Predicted RBP	11.64	□□□□□ -0.55

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