RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 FMODQ06828 376 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 ARFRP1Q13795 201 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 UBE2V2Q15819 145 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 GGNBP1Q5YKI7 109 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 ZNF385CQ66K41 422 aaPredicted RBP11.31□□□□□ -0.6
MSH5-204ENST00000375755 HSD17B11Q8NBQ5 300 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 PLPP5Q8NEB5 264 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 CSNK2A3Q8NEV1 391 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 HPSE2Q8WWQ2 592 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 EMG1Q92979 244 aaKnown RBP11.31□□□□□ -0.6
MSH5-204ENST00000375755 NELFAQ9H3P2 528 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 BCO1Q9HAY6 547 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 WASF3Q9UPY6 502 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 MRPS28Q9Y2Q9 187 aaKnown RBP11.31□□□□□ -0.6
MSH5-204ENST00000375755 CNTRLQ7Z7A1 2325 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 EXPH5Q8NEV8 1989 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 OR5H15A6NDH6 313 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 OR5H1A6NKK0 313 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 SYT7O43581 403 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 CDC14BO60729 498 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 CELA2AP08217 269 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 KLK2P20151 261 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 PCP4P48539 62 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 CCL20P78556 96 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 FOXK1P85037 733 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 SGCBQ16585 318 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 DNLZQ5SXM8 178 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 NUP54Q7Z3B4 507 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 NFAM1Q8NET5 270 aaPredicted RBP11.31□□□□□ -0.6
MSH5-204ENST00000375755 FAM213BQ8TBF2 198 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 NEU1Q99519 415 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 PLEKHA2Q9HB19 425 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 RCL1Q9Y2P8 373 aaKnown RBP11.31□□□□□ -0.6
MSH5-204ENST00000375755 BORCS7-ASMTA0A0B4J1R7 106 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 ADAM10O14672 748 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 H2BFMP0C1H6 154 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 ZNF823P16415 610 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 OR3A4PP47883 348 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 P2RY1P47900 373 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 SNU13P55769 128 aaKnown RBP11.3□□□□□ -0.6
MSH5-204ENST00000375755 HAGHQ16775 308 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 PLXDC2Q6UX71 529 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 RABEPKQ7Z6M1 372 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 LRRC18Q8N456 261 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 SLC26A10Q8NG04 563 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 OR10AD1Q8NGE0 317 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 FAM206AQ9NX38 181 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 SHISA8B8ZZ34 492 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 H0YL77 283 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 TCAPO15273 167 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 TOX3O15405 576 aaPredicted RBP11.3□□□□□ -0.6
MSH5-204ENST00000375755 MBPP02686 304 aaPredicted RBP11.3□□□□□ -0.6
MSH5-204ENST00000375755 HLA-DOBP13765 273 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 CEBPGP53567 150 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 NKX6-1P78426 367 aaPredicted RBP11.3□□□□□ -0.6
MSH5-204ENST00000375755 TMEM182Q6ZP80 229 aaPredicted RBP11.3□□□□□ -0.6
MSH5-204ENST00000375755 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.3□□□□□ -0.6
MSH5-204ENST00000375755 TBL1XR1Q9BZK7 514 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
MSH5-204ENST00000375755 RFNGQ9Y644 331 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 SDK2Q58EX2 2172 aa11.3□□□□□ -0.6
MSH5-204ENST00000375755 CYB5BO43169 146 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 XRCC2O43543 280 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 PAX1P15863 534 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 HIKESHIQ53FT3 197 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 OR2T2Q6IF00 324 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 WDFY1Q8IWB7 410 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 OR5D14Q8NGL3 314 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 C14orf166Q9Y224 244 aaKnown RBP11.29□□□□□ -0.6
MSH5-204ENST00000375755 IGLV3-12A0A075B6K2 115 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 ELOA3CA0A087WX78 387 aaPredicted RBP11.29□□□□□ -0.6
MSH5-204ENST00000375755 TRBV11-1A0A0K0K1C0 115 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 A0A1B0GW64 132 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 HSD17B6O14756 317 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 MMP16P51512 607 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 UBE2KP61086 200 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 PEAR1Q5VY43 1037 aaPredicted RBP11.29□□□□□ -0.6
MSH5-204ENST00000375755 ALKBH2Q6NS38 261 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 TMEM59Q9BXS4 323 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 IGKV1D-43A0A0B4J1Z2 117 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 K7N7A8 449 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 SOX15O60248 233 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 PTBP3O95758 552 aaKnown RBP11.29□□□□□ -0.6
MSH5-204ENST00000375755 DLK1P80370 383 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 OR5AS1Q8N127 324 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 ABHD5Q8WTS1 349 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 TMEM68Q96MH6 324 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 SOX7Q9BT81 388 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 PBOV1Q9GZY1 135 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 ARRDC1-AS1Q9H2J1 176 aa11.29□□□□□ -0.6
MSH5-204ENST00000375755 E5RGE8 158 aa11.28□□□□□ -0.6
MSH5-204ENST00000375755 CRTAPO75718 401 aaPredicted RBP11.28□□□□□ -0.6
MSH5-204ENST00000375755 DIRAS3O95661 229 aa11.28□□□□□ -0.6
MSH5-204ENST00000375755 IFNA21P01568 189 aa11.28□□□□□ -0.6
MSH5-204ENST00000375755 SNRPCP09234 159 aaKnown RBP11.28□□□□□ -0.6
MSH5-204ENST00000375755 TRGC1P0CF51 173 aa11.28□□□□□ -0.6
MSH5-204ENST00000375755 IL11P20809 199 aa11.28□□□□□ -0.6
MSH5-204ENST00000375755 LFNGQ8NES3 379 aa11.28□□□□□ -0.6
MSH5-204ENST00000375755 KCNG3Q8TAE7 436 aa11.28□□□□□ -0.6
MSH5-204ENST00000375755 FRZBQ92765 325 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms