RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 MRGPRX4Q96LA9 322 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 TAAR9Q96RI9 348 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 SPSB2Q99619 263 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 TM2D1Q9BX74 207 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 ARV1Q9H2C2 271 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 PLEKHA2Q9HB19 425 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 ANXA10Q9UJ72 324 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 RCL1Q9Y2P8 373 aaKnown RBP12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 SHANK1Q9Y566 2161 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 ZNF850A8MQ14 1090 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 PPP1CCP36873 323 aaKnown RBP12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 NOVA1P51513 510 aaKnown RBP12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 CLDN17P56750 224 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 CCL7P80098 99 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 RSPO1Q2MKA7 263 aaPredicted RBP12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 ACER2Q5QJU3 275 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 PHYHD1Q5SRE7 291 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 LURAP1LQ8IV03 231 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 AKR7LQ8NHP1 331 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 PIGQQ9BRB3 760 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 BCL2L14Q9BZR8 327 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 METTL7AQ9H8H3 244 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 LUZP4Q9P127 313 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 E5RGE8 158 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 SEC11BP0C7V7 166 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 MPLP40238 635 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 PTGDSP41222 190 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 ALDH3B1P43353 468 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 GRB2P62993 217 aaKnown RBP12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 SLC16A14Q7RTX9 510 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 PLXDC1Q8IUK5 500 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 ZNF501Q96CX3 271 aaPredicted RBP12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 RARRES2Q99969 163 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 DUSP23Q9BVJ7 150 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 TUBA4BQ9H853 241 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 GPR173Q9NS66 373 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 NSG2Q9Y328 171 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 EXPH5Q8NEV8 1989 aa12.3□□□□□ -0.44
CLCNKA-202ENST00000375692 SPRY1O43609 319 aaPredicted RBP12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 DHRS3O75911 302 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 RD3LP0DJH9 198 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 UCP2P55851 309 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 TMEM187Q14656 261 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 HIST3H3Q16695 136 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 LINC00469Q8N7U9 141 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 OR5L1Q8NGL2 311 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 RTN4IP1Q8WWV3 396 aaPredicted RBP12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 HAS2Q92819 552 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 MARS2Q96GW9 593 aaKnown RBP12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 OXGR1Q96P68 337 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 GINS3Q9BRX5 216 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 AK3Q9UIJ7 227 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 B3GALT1Q9Y5Z6 326 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 PUS1Q9Y606 427 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 BORCS7-ASMTA0A0B4J1R7 106 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 RRP8O43159 456 aaKnown RBP12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 GDF9O60383 454 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 OR2J2O76002 312 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 HEXBP07686 556 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 ITGA3P26006 1051 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 SLC35A1P78382 337 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 TMEM182Q6ZP80 229 aaPredicted RBP12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 ZNF565Q8N9K5 539 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 OR11L1Q8NGX0 322 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 FAM213BQ8TBF2 198 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 HPSE2Q8WWQ2 592 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 OR51M1Q9H341 326 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 KCNJ16Q9NPI9 418 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 KCNIP3Q9Y2W7 256 aa12.29□□□□□ -0.44
CLCNKA-202ENST00000375692 ETV2O00321 342 aaPredicted RBP12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 GPR37O15354 613 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 IGLV3-1P01715 115 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 ZNF728P0DKX0 622 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 P2RY1P47900 373 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 KCNMB1Q16558 191 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 ABCA11PQ4W5N1 156 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 Q96M66 194 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 SLC35B3Q9H1N7 401 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 NAA60Q9H7X0 242 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 TINAGQ9UJW2 476 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 V9GYS6 101 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 IGHV3-15A0A0B4J1V0 119 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 AP4M1O00189 453 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 GPR137BO60478 399 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 MTCP1P56278 107 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 CCL20P78556 96 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 ABHD14AQ9BUJ0 271 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 CHST5Q9GZS9 411 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 DECR2Q9NUI1 292 aa12.28□□□□□ -0.44
CLCNKA-202ENST00000375692 CCDC187A0A096LP49 1063 aa12.27□□□□□ -0.44
CLCNKA-202ENST00000375692 FAM230AA0A1W2PPH8 454 aa12.27□□□□□ -0.44
CLCNKA-202ENST00000375692 EIF2S3P41091 472 aaKnown RBP12.27□□□□□ -0.44
CLCNKA-202ENST00000375692 ENDOGQ14249 297 aaKnown RBP12.27□□□□□ -0.44
CLCNKA-202ENST00000375692 PDCD1Q15116 288 aa12.27□□□□□ -0.44
CLCNKA-202ENST00000375692 TSC22D1Q15714 1073 aa12.27□□□□□ -0.44
CLCNKA-202ENST00000375692 SNAI3Q3KNW1 292 aa12.27□□□□□ -0.44
CLCNKA-202ENST00000375692 SLC25A53Q5H9E4 307 aa12.27□□□□□ -0.44
CLCNKA-202ENST00000375692 WDR74Q6RFH5 385 aaPredicted RBP12.27□□□□□ -0.44
CLCNKA-202ENST00000375692 OR1J1Q8NGS3 322 aa12.27□□□□□ -0.44
CLCNKA-202ENST00000375692 OR2AE1Q8NHA4 323 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms