RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 CCKARP32238 428 aa18.77■□□□□ 0.59
TGFBR1-202ENST00000374994 NEIL1Q96FI4 390 aaPredicted RBP18.77■□□□□ 0.59
TGFBR1-202ENST00000374994 OR5G3P0C626 314 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 TRA2AQ13595 282 aaKnown RBP eCLIP18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 TMEM147Q9BVK8 224 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 SF3B6Q9Y3B4 125 aaKnown RBP18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 SDK1Q7Z5N4 2213 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 ST8SIA5O15466 376 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 ERGP11308 486 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 ZNF32P17041 273 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 KRTDAPP60985 99 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 COX19Q49B96 90 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 TOMM20LQ6UXN7 152 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 SCCPDHQ8NBX0 429 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 PROCRQ9UNN8 238 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 OR5B21A6NL26 309 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 SHISA8B8ZZ34 492 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 PRDX4Q13162 271 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 SMAD4Q13485 552 aaKnown RBP18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 PARD6AQ9NPB6 346 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 CACNG5Q9UF02 275 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 ACAA2P42765 397 aaKnown RBP18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 ERVFC1-1P60608 527 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 ZNF816Q0VGE8 651 aaPredicted RBP18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 ETFDHQ16134 617 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 MYO9BQ13459 2157 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 TRBV5-5A0A0J9YX44 114 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 DVL1O14640 695 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 SULT1A1P50225 295 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 ASCL1P50553 236 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 ZNF774Q6NX45 483 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 FAM60AQ9NP50 221 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 LY75O60449 1722 aa18.76■□□□□ 0.59
TGFBR1-202ENST00000374994 SOCS1O15524 211 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 J3QR89 54 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 KRASP01116 189 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 BSXQ3C1V8 233 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 ZAR1Q86SH2 424 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 GPX7Q96SL4 187 aaPredicted RBP18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 SF3B5Q9BWJ5 86 aaKnown RBP18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 MANBALQ9NQG1 85 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 SLC22A20A6NK97 555 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 LPAR6P43657 344 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 TMEM267Q0VDI3 215 aaPredicted RBP18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 C1orf53Q5VUE5 145 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 OR10AC1Q8NH08 325 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 POM121L2Q96KW2 1035 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 MS4A7Q9GZW8 240 aaPredicted RBP18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 TOX3O15405 576 aaPredicted RBP18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 HOGA1Q86XE5 327 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 ANAPC16Q96DE5 110 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 FAM173AQ9BQD7 235 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 SARGQ9BW04 601 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 MFRPQ9BY79 579 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 SLC45A2Q9UMX9 530 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 MFSD2BA6NFX1 497 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 VSIG10L2P0DP72 767 aa18.75■□□□□ 0.59
TGFBR1-202ENST00000374994 FAM157BP0CG42 384 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 HNF1AP20823 631 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 IL11RAQ14626 422 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 TMEM183BQ1AE95 376 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 MS4A10Q96PG2 267 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 ARFGEF1Q9Y6D6 1849 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 GAPDHP04406 335 aaKnown RBP18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 HNRNPA3P51991 378 aaKnown RBP18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 H0Y8G0 127 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 RNPS1Q15287 305 aaKnown RBP18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 SSX7Q7RTT5 188 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 C1QTNF6Q9BXI9 259 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 CDRT15L2A8MXV6 281 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 NGFP01138 241 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 FOXO1Q12778 655 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 WDR73Q6P4I2 378 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 CLCF1Q9UBD9 225 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 LOXL2Q9Y4K0 774 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 MPC1Q9Y5U8 109 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 NANOS3P60323 173 aaKnown RBP18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 VAMP3Q15836 100 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 C19orf35Q6ZS72 473 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 TMEM104Q8NE00 496 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 DEFB127Q9H1M4 99 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 C1QCP02747 245 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 DMWDQ09019 674 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 VAX1Q5SQQ9 334 aa18.74■□□□□ 0.59
TGFBR1-202ENST00000374994 TOX4O94842 621 aa18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 CDC34P49427 236 aaPredicted RBP18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 PGLYRP3Q96LB9 341 aa18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 POLR2GP62487 172 aaKnown RBP eCLIP18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 ZNRF4Q8WWF5 429 aa18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 CNIH1O95406 144 aa18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 ANKRD34CP0C6C1 535 aa18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 SRD5A2P31213 254 aa18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 EFNB2P52799 333 aa18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 ARL16Q0P5N6 197 aa18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 FAM74A3Q4VXF1 159 aa18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 TMEM211Q6ICI0 200 aa18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 DPPA3Q6W0C5 159 aa18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 GPR37O15354 613 aa18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 HLA-GP17693 338 aa18.73■□□□□ 0.59
TGFBR1-202ENST00000374994 DUSP2Q05923 314 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms