RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 SPSB1Q96BD6 273 aa13.5□□□□□ -0.25
TMEM50A-201ENST00000374358 CNTNAP3BQ96NU0 1288 aa13.5□□□□□ -0.25
TMEM50A-201ENST00000374358 CNTNAP3Q9BZ76 1288 aa13.5□□□□□ -0.25
TMEM50A-201ENST00000374358 OR6C6A6NF89 314 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 RPL12P30050 165 aaKnown RBP13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 SRD5A2P31213 254 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 FAM3AP98173 230 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 SCRN3Q0VDG4 424 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 PRO3102Q9H379 93 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 P4HTMQ9NXG6 502 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 CRIM1Q9NZV1 1036 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 ST3GAL6Q9Y274 331 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 K7EPK0 472 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 APOC1P02654 83 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 CTSDP07339 412 aaPredicted RBP13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 CYC1P08574 325 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 TCN2P20062 427 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 GDF1P27539 372 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 NPBWR2P48146 333 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 SRYQ05066 204 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 SURF2Q15527 256 aaPredicted RBP13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 STK11Q15831 433 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 SPINK14Q6IE38 97 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 LYZL2Q7Z4W2 148 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 SVBPQ8N300 66 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 FAM71E2Q8N5Q1 922 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 OR2H1Q9GZK4 316 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 MMP26Q9NRE1 261 aa13.49□□□□□ -0.25
TMEM50A-201ENST00000374358 C3orf80F5H4A9 247 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 CST2P09228 141 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 PET100P0DJ07 73 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 EDN3P14138 238 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 CCNOP22674 350 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 NFYBP25208 207 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 FCGR2CP31995 323 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 TMEM33P57088 247 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 PABPC1L2AQ5JQF8 200 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 PLCXD3Q63HM9 321 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 TIPARPQ7Z3E1 657 aaKnown RBP13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 GPHA2Q96T91 129 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 RHOFQ9HBH0 211 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 PCDHB16Q9NRJ7 776 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 UQCC1Q9NVA1 299 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 PURGQ9UJV8 347 aaKnown RBP13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 CFAP47Q6ZTR5 3102 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 ZFHX4Q86UP3 3567 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 A0A096LPE4 126 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 A0A1W2PPZ6 126 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 MED19A0JLT2 244 aaPredicted RBP13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 C9JQL5 133 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 DEDDO75618 318 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 CELA3AP09093 270 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 DAZAP2Q15038 168 aaPredicted RBP13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 CNN3Q15417 329 aaKnown RBP13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 IQCF2Q8IXL9 164 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 CPEB3Q8NE35 698 aaKnown RBP13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 RTN4IP1Q8WWV3 396 aaPredicted RBP13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 INTS12Q96CB8 462 aaKnown RBP13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 C10orf35Q96D05 121 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 CDX2Q99626 313 aaPredicted RBP13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 SF3B5Q9BWJ5 86 aaKnown RBP13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 TCFL5Q9UL49 500 aa13.48□□□□□ -0.25
TMEM50A-201ENST00000374358 hCG_38984A0A1B0GV85 526 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 GJE1A6NN92 205 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 RRP8O43159 456 aaKnown RBP13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 ZNF728P0DKX0 622 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 FOXG1P55316 489 aaPredicted RBP13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 PJVKQ0ZLH3 352 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 EIF3IQ13347 325 aaKnown RBP13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 ACER2Q5QJU3 275 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 ADGRG7Q96K78 797 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 HES7Q9BYE0 225 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 AMDHD2Q9Y303 409 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 MEMO1Q9Y316 297 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 MED13Q9UHV7 2174 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 MBPP02686 304 aaPredicted RBP13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 HAGHLQ6PII5 290 aaPredicted RBP13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 OSR2Q8N2R0 312 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 OR2V1Q8NHB1 315 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 CPT1CQ8TCG5 803 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 SGCZQ96LD1 299 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 HS3ST6Q96QI5 342 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 PRRX2Q99811 253 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 GPR35Q9HC97 309 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 NECAP2Q9NVZ3 263 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 DNAJB11Q9UBS4 358 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 OR7C1O76099 320 aaPredicted RBP13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 TDGF1P13385 188 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 ASCL1P50553 236 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 ABCA11PQ4W5N1 156 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 ETV3LQ6ZN32 361 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 OR52M1Q8NGK5 317 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 SLC2A9Q9NRM0 540 aa13.47□□□□□ -0.25
TMEM50A-201ENST00000374358 HSPB6O14558 160 aa13.46□□□□□ -0.25
TMEM50A-201ENST00000374358 TERTO14746 1132 aaKnown RBP13.46□□□□□ -0.25
TMEM50A-201ENST00000374358 OR8U9P0C7N5 309 aa13.46□□□□□ -0.25
TMEM50A-201ENST00000374358 PDZK1IP1Q13113 114 aa13.46□□□□□ -0.25
TMEM50A-201ENST00000374358 ARL6IP1Q15041 203 aa13.46□□□□□ -0.25
TMEM50A-201ENST00000374358 AKIRIN2Q53H80 203 aa13.46□□□□□ -0.25
TMEM50A-201ENST00000374358 IGSF11Q5DX21 431 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms