RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 RGS19P49795 217 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 PRSS12P56730 875 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 ZNF385CQ66K41 422 aaPredicted RBP11.98□□□□□ -0.49
USP49-201ENST00000373006 UEVLDQ8IX04 471 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 MR1Q95460 341 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 PGAM5Q96HS1 289 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 NSG2Q9Y328 171 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 IFITM10A6NMD0 228 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 SLC33A1O00400 549 aaPredicted RBP11.98□□□□□ -0.49
USP49-201ENST00000373006 EDN3P14138 238 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 APOBEC1P41238 236 aaKnown RBP11.98□□□□□ -0.49
USP49-201ENST00000373006 ARL4DP49703 201 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 TAS2R60P59551 318 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 RNF4P78317 190 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 RHEBQ15382 184 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 DOK3Q7L591 496 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 C20orf196Q8IYI0 205 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 OR1L3Q8NH93 324 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 DYRK2Q92630 601 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 LYZL4Q96KX0 146 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 C8orf33Q9H7E9 229 aaPredicted RBP11.98□□□□□ -0.49
USP49-201ENST00000373006 ANKUB1A6NFN9 424 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 TLCD2A6NGC4 264 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 MBP02144 154 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 FBLP22087 321 aaKnown RBP11.98□□□□□ -0.49
USP49-201ENST00000373006 P2RY1P47900 373 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 BLKP51451 505 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 NSUN5P2Q63ZY6 315 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 OR5L1Q8NGL2 311 aa11.98□□□□□ -0.49
USP49-201ENST00000373006 FOXI3A8MTJ6 420 aaPredicted RBP11.97□□□□□ -0.49
USP49-201ENST00000373006 CDRT15L2A8MXV6 281 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 MSTNO14793 375 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 ANGPTL7O43827 346 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 CNOT4O95628 575 aaKnown RBP11.97□□□□□ -0.49
USP49-201ENST00000373006 CTSDP07339 412 aaPredicted RBP11.97□□□□□ -0.49
USP49-201ENST00000373006 PGA4P0DJD7 388 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 PGA3P0DJD8 388 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 IGFBP4P22692 258 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 TSPAN7P41732 249 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 C17orf67Q0P5P2 114 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 TAF9Q16594 264 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 AKR1C8PQ5T2L2 129 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 ZNF441Q8N8Z8 693 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 SUMF2Q8NBJ7 301 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 RTN4IP1Q8WWV3 396 aaPredicted RBP11.97□□□□□ -0.49
USP49-201ENST00000373006 TMEM68Q96MH6 324 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 MOB1AQ9H8S9 216 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 PNRC2Q9NPJ4 139 aaKnown RBP11.97□□□□□ -0.49
USP49-201ENST00000373006 KCNIP3Q9Y2W7 256 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 SERPINE3A8MV23 424 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 PPP1R2P9O14990 202 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 IGHG1P01857 330 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 UCP2P55851 309 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 FAM189A2Q15884 450 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 ABCA11PQ4W5N1 156 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 HEPN1Q6WQI6 88 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 SSC4DQ8WTU2 575 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 ST8SIA1Q92185 356 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 GINS3Q9BRX5 216 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 PBDC1Q9BVG4 233 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 ARV1Q9H2C2 271 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 HDGFL3Q9Y3E1 203 aa11.97□□□□□ -0.49
USP49-201ENST00000373006 SCAF4O95104 1147 aaKnown RBP11.96□□□□□ -0.49
USP49-201ENST00000373006 COX5BP10606 129 aa11.96□□□□□ -0.49
USP49-201ENST00000373006 OMGP23515 440 aa11.96□□□□□ -0.49
USP49-201ENST00000373006 SFTPDP35247 375 aa11.96□□□□□ -0.49
USP49-201ENST00000373006 FASLGP48023 281 aa11.96□□□□□ -0.49
USP49-201ENST00000373006 SMAD4Q13485 552 aaKnown RBP11.96□□□□□ -0.49
USP49-201ENST00000373006 KIAA0895LQ68EN5 471 aa11.96□□□□□ -0.49
USP49-201ENST00000373006 COMMD1Q8N668 190 aa11.96□□□□□ -0.49
USP49-201ENST00000373006 ZFP62Q8NB50 900 aaPredicted RBP11.96□□□□□ -0.49
USP49-201ENST00000373006 NOXO1Q8NFA2 376 aa11.96□□□□□ -0.49
USP49-201ENST00000373006 PRDM13Q9H4Q3 707 aa11.96□□□□□ -0.49
USP49-201ENST00000373006 ALKBH4Q9NXW9 302 aa11.96□□□□□ -0.49
USP49-201ENST00000373006 KLRF1Q9NZS2 232 aa11.96□□□□□ -0.49
USP49-201ENST00000373006 ANXA10Q9UJ72 324 aa11.96□□□□□ -0.49
USP49-201ENST00000373006 MMP7P09237 267 aaPredicted RBP11.96□□□□□ -0.5
USP49-201ENST00000373006 NKX6-1P78426 367 aaPredicted RBP11.96□□□□□ -0.5
USP49-201ENST00000373006 FBXW12Q6X9E4 464 aa11.96□□□□□ -0.5
USP49-201ENST00000373006 P4HA3Q7Z4N8 544 aa11.96□□□□□ -0.5
USP49-201ENST00000373006 CPEB2Q7Z5Q1 589 aaKnown RBP11.96□□□□□ -0.5
USP49-201ENST00000373006 LRRC18Q8N456 261 aa11.96□□□□□ -0.5
USP49-201ENST00000373006 OR11L1Q8NGX0 322 aa11.96□□□□□ -0.5
USP49-201ENST00000373006 MALSU1Q96EH3 234 aa11.96□□□□□ -0.5
USP49-201ENST00000373006 SHANK1Q9Y566 2161 aa11.96□□□□□ -0.5
USP49-201ENST00000373006 FAM186AA6NE01 2351 aa11.96□□□□□ -0.5
USP49-201ENST00000373006 NCOA6Q14686 2063 aaPredicted RBP11.96□□□□□ -0.5
USP49-201ENST00000373006 CYB5BO43169 146 aa11.95□□□□□ -0.5
USP49-201ENST00000373006 GPR137BO60478 399 aa11.95□□□□□ -0.5
USP49-201ENST00000373006 FOLR1P15328 257 aa11.95□□□□□ -0.5
USP49-201ENST00000373006 HOXA5P20719 270 aa11.95□□□□□ -0.5
USP49-201ENST00000373006 CHATP28329 748 aa11.95□□□□□ -0.5
USP49-201ENST00000373006 BATFQ16520 125 aa11.95□□□□□ -0.5
USP49-201ENST00000373006 HAGHQ16775 308 aa11.95□□□□□ -0.5
USP49-201ENST00000373006 CLEC12BQ2HXU8 276 aa11.95□□□□□ -0.5
USP49-201ENST00000373006 STT3BQ8TCJ2 826 aa11.95□□□□□ -0.5
USP49-201ENST00000373006 HPSE2Q8WWQ2 592 aa11.95□□□□□ -0.5
USP49-201ENST00000373006 OPA3Q9H6K4 179 aa11.95□□□□□ -0.5
USP49-201ENST00000373006 ZNF160Q9HCG1 818 aa11.95□□□□□ -0.5
USP49-201ENST00000373006 KLHL13Q9P2N7 655 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms