RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 ANGPTL7O43827 346 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 QDPRP09417 244 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 HOXA5P20719 270 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 GPX4P36969 197 aaPredicted RBP12.92□□□□□ -0.34
COL9A2-202ENST00000372748 TAF9Q16594 264 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 ZNF674Q2M3X9 581 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 FBXW12Q6X9E4 464 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 ZNF574Q6ZN55 896 aaPredicted RBP12.92□□□□□ -0.34
COL9A2-202ENST00000372748 ZFP62Q8NB50 900 aaPredicted RBP12.92□□□□□ -0.34
COL9A2-202ENST00000372748 ST8SIA1Q92185 356 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 ALKBH4Q9NXW9 302 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 KLRF1Q9NZS2 232 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 KLHL13Q9P2N7 655 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 KCNIP3Q9Y2W7 256 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 SHANK1Q9Y566 2161 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 GPR137BO60478 399 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 SLC34A2O95436 690 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 OMGP23515 440 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 S100A2P29034 98 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 C17orf67Q0P5P2 114 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 SMAD4Q13485 552 aaKnown RBP12.92□□□□□ -0.34
COL9A2-202ENST00000372748 HAGHQ16775 308 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 OR11L1Q8NGX0 322 aa12.92□□□□□ -0.34
COL9A2-202ENST00000372748 MARS2Q96GW9 593 aaKnown RBP12.92□□□□□ -0.34
COL9A2-202ENST00000372748 NSG1A0A0A6YYJ2 146 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 H0YL77 283 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 TIAF1O95411 115 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 CXCL1P09341 107 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 ZNF43P17038 809 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 CDX1P47902 265 aaPredicted RBP12.91□□□□□ -0.34
COL9A2-202ENST00000372748 DEFA6Q01524 100 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 GFI1BQ5VTD9 330 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 FAM69BQ5VUD6 431 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 SPNS3Q6ZMD2 512 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 HIST2H3AQ71DI3 136 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 MUCL1Q96DR8 90 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 YPEL4Q96NS1 127 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 PIGQQ9BRB3 760 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 TREM2Q9NZC2 230 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 NCOA6Q14686 2063 aaPredicted RBP12.91□□□□□ -0.34
COL9A2-202ENST00000372748 TRBV11-1A0A0K0K1C0 115 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 NPIPB13A6NJU9 1138 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 NPIPB4C9JG80 1138 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 H3BQ15 152 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 HEXBP07686 556 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 ZNF728P0DKX0 622 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 TAGLN2P37802 199 aaKnown RBP12.91□□□□□ -0.34
COL9A2-202ENST00000372748 TMEM187Q14656 261 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 CPEB2Q7Z5Q1 589 aaKnown RBP12.91□□□□□ -0.34
COL9A2-202ENST00000372748 PLPP5Q8NEB5 264 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 OR10D4PQ8NGN7 298 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 INTS12Q96CB8 462 aaKnown RBP12.91□□□□□ -0.34
COL9A2-202ENST00000372748 RAB39BQ96DA2 213 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 GAR1Q9NY12 217 aaKnown RBP12.91□□□□□ -0.34
COL9A2-202ENST00000372748 COL5A1P20908 1838 aaPredicted RBP12.91□□□□□ -0.34
COL9A2-202ENST00000372748 SLC33A1O00400 549 aaPredicted RBP12.91□□□□□ -0.34
COL9A2-202ENST00000372748 SRFP11831 508 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 FOSL2P15408 326 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 CCL1P22362 96 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 SFTPDP35247 375 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 RAB1AP62820 205 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 ANKRD37Q7Z713 158 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 SUMF1Q8NBK3 374 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 Q8WTZ3 238 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 CHST5Q9GZS9 411 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 NAA60Q9H7X0 242 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 ZNF160Q9HCG1 818 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 PIGLQ9Y2B2 252 aa12.91□□□□□ -0.34
COL9A2-202ENST00000372748 SPRY1O43609 319 aaPredicted RBP12.9□□□□□ -0.34
COL9A2-202ENST00000372748 TRAF3IP2O43734 574 aaPredicted RBP12.9□□□□□ -0.34
COL9A2-202ENST00000372748 GLB1P16278 677 aa12.9□□□□□ -0.34
COL9A2-202ENST00000372748 MEX3BQ6ZN04 569 aaKnown RBP12.9□□□□□ -0.34
COL9A2-202ENST00000372748 C1QL4Q86Z23 238 aa12.9□□□□□ -0.34
COL9A2-202ENST00000372748 NELFAQ9H3P2 528 aa12.9□□□□□ -0.34
COL9A2-202ENST00000372748 STRAPQ9Y3F4 350 aaKnown RBP12.9□□□□□ -0.34
COL9A2-202ENST00000372748 CCDC163A0A0D9SF12 145 aa12.9□□□□□ -0.34
COL9A2-202ENST00000372748 K7N7A8 449 aa12.9□□□□□ -0.34
COL9A2-202ENST00000372748 LMO1P25800 156 aa12.9□□□□□ -0.34
COL9A2-202ENST00000372748 SUCLG1P53597 346 aaKnown RBP12.9□□□□□ -0.34
COL9A2-202ENST00000372748 LRRC18Q8N456 261 aa12.9□□□□□ -0.34
COL9A2-202ENST00000372748 OR2G3Q8NGZ4 309 aa12.9□□□□□ -0.34
COL9A2-202ENST00000372748 ZNF700Q9H0M5 742 aa12.9□□□□□ -0.34
COL9A2-202ENST00000372748 AK3Q9UIJ7 227 aa12.9□□□□□ -0.34
COL9A2-202ENST00000372748 CCDC187A0A096LP49 1063 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 TGIF2-C20orf24A0A0A6YYL0 155 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 RBFOX3A6NFN3 312 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 FAM24AA6NFZ4 105 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 ST8SIA3O43173 380 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 DBHP09172 617 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 CSNK1A1P48729 337 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 ERVFRD-1P60508 538 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 NTNG2Q96CW9 530 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 GPR61Q9BZJ8 451 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 SLC2A9Q9NRM0 540 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 PPP4R1LQ9P1A2 415 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 ADAMTS9Q9P2N4 1935 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 LIPGQ9Y5X9 500 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 OR5H15A6NDH6 313 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 ONECUT2O95948 504 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 ZNF41P51814 821 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms