RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 A0A1W2PP11 408 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 RFPL4AA6NLU0 287 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 MCRIP1C9JLW8 97 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 RFPL4AL1F8VTS6 287 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 CSTBP04080 98 aaKnown RBP12.16□□□□□ -0.46
LDB3-204ENST00000372066 TMEM225BP0DP42 221 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 AMY2BP19961 511 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 FPR2P25090 351 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 SSTR2P30874 369 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 ARR3P36575 388 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 RIPPLY3P57055 190 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 ARF1P84077 181 aaKnown RBP12.16□□□□□ -0.46
LDB3-204ENST00000372066 FAM3AP98173 230 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 SRYQ05066 204 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 SURF2Q15527 256 aaPredicted RBP12.16□□□□□ -0.46
LDB3-204ENST00000372066 GRK1Q15835 563 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 MICBQ29980 383 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 OR5D18Q8NGL1 313 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 OR2AE1Q8NHA4 323 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 PHB2Q99623 299 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 MAB21L2Q9Y586 359 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 FBN2P35556 2912 aa12.16□□□□□ -0.46
LDB3-204ENST00000372066 PKDREJQ9NTG1 2253 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 A0A0B4J2A0 478 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 C9orf170A2RU37 121 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 LINC00862A6NCI5 91 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 NOS1APO75052 506 aaPredicted RBP12.15□□□□□ -0.46
LDB3-204ENST00000372066 RAD51DO75771 328 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 DUS4LO95620 317 aaKnown RBP12.15□□□□□ -0.46
LDB3-204ENST00000372066 PMP2P02689 132 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 SERPINA5P05154 406 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 RPA2P15927 270 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 RFC3P40938 356 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 RSU1Q15404 277 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 C3P1Q6ZMU1 363 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 C1QL2Q7Z5L3 287 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 DOLPP1Q86YN1 238 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 TUSC5Q8IXB3 177 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 TMEM185AQ8NFB2 350 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 MRGPRFQ96AM1 343 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 DPCDQ9BVM2 203 aaPredicted RBP12.15□□□□□ -0.46
LDB3-204ENST00000372066 ELL3Q9HB65 397 aaPredicted RBP12.15□□□□□ -0.46
LDB3-204ENST00000372066 SHPKQ9UHJ6 478 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 ZNF175Q9Y473 711 aa12.15□□□□□ -0.46
LDB3-204ENST00000372066 OR2AT4A6NND4 320 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 PRRG2O14669 202 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 MPC2O95563 127 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 CXCL2P19875 107 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 S100A11P31949 105 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 OR3A3P47888 321 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 OR3A2P47893 321 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 IL13RA1P78552 427 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 C2orf68Q2NKX9 166 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 TMEM128Q5BJH2 165 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 CLLU1Q5K131 121 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 LY6G6FQ5SQ64 297 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 DCAF12L2Q5VW00 463 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 TMEM65Q6PI78 240 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 PEG10Q86TG7 708 aaKnown RBP12.14□□□□□ -0.47
LDB3-204ENST00000372066 LHFPL1Q86WI0 220 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 ZSCAN4Q8NAM6 433 aaPredicted RBP12.14□□□□□ -0.47
LDB3-204ENST00000372066 FGFBP3Q8TAT2 258 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 FNDC9Q8TBE3 224 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 CALHM2Q9HA72 323 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 COMMD9Q9P000 198 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 POLQO75417 2590 aa12.14□□□□□ -0.47
LDB3-204ENST00000372066 FAM230AA0A1W2PPH8 454 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 RP2O75695 350 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 SIX6O95475 246 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 PPP3CBP16298 524 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 DTYMKP23919 212 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 PMELP40967 661 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 ZNF92Q03936 586 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 PPP1R1AQ13522 171 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 EXOSC2Q13868 293 aaKnown RBP12.13□□□□□ -0.47
LDB3-204ENST00000372066 RNFT1Q5M7Z0 435 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 CSNK2A3Q8NEV1 391 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 OR5AP2Q8NGF4 316 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 CA5BP1Q8WTZ4 195 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 C17orf50Q8WW18 174 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 APOBEC3DQ96AK3 386 aaPredicted RBP12.13□□□□□ -0.47
LDB3-204ENST00000372066 SPOCK3Q9BQ16 436 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 VKORC1Q9BQB6 163 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 ZDHHC11Q9H8X9 412 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 GPR132Q9UNW8 380 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 PDZD2O15018 2839 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 FXYD6-FXYD2A0A087WZ82 144 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 TRGV5A0A0B4J1U4 118 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 TPD52L2O43399 206 aaKnown RBP12.13□□□□□ -0.47
LDB3-204ENST00000372066 HTR3BO95264 441 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 PATE4P0C8F1 98 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 SLC25A4P12235 298 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 SNU13P55769 128 aaKnown RBP12.13□□□□□ -0.47
LDB3-204ENST00000372066 KRTAP10-9P60411 292 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 RAB14P61106 215 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 PLP2Q04941 152 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 MALLQ13021 153 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 OR10K1Q8NGX5 313 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 ANGPTL6Q8NI99 470 aa12.13□□□□□ -0.47
LDB3-204ENST00000372066 NANOS1Q8WY41 292 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms