RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 DMRTC1Q5HYR2 192 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 OR2T2Q6IF00 324 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 C6orf201Q7Z4U5 140 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF485Q8NCK3 441 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 OR5A2Q8NGI9 324 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 MARVELD3Q96A59 401 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 SMIM3Q9BZL3 60 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 GP6Q9HCN6 339 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF629Q9UEG4 869 aaPredicted RBP4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 NDRG3Q9UGV2 375 aa4.66□□□□□ -1.66
SMNDC1-202ENST00000369603 FAM221AA4D161 298 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 NUDT19A8MXV4 375 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 E5RGE8 158 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 E9PQ18 207 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 SIRPB1O00241 398 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 GPR31O00270 319 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 SSX5O60225 188 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 KLF7O75840 302 aaPredicted RBP4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 DFFBO76075 338 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 SFT2D2O95562 160 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 TMIGD3P0DMS9 266 aaPredicted RBP4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 COX5BP10606 129 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 HOXB1P14653 301 aaPredicted RBP4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 EFNB2P52799 333 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 PSG4Q00888 419 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 RHEBQ15382 184 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 OR8B8Q15620 311 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 MPV17LQ2QL34 196 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 GFRALQ6UXV0 394 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 C1orf87Q8N0U7 546 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 TMEM45BQ96B21 275 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 FAAP24Q9BTP7 215 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 LINC00470Q9BZP3 86 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 LIN7CQ9NUP9 197 aaKnown RBP4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 UFSP2Q9NUQ7 469 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 FOXJ2Q9P0K8 574 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 NSG2Q9Y328 171 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 LOC390937A0A1W2PQ73 354 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 SHISA3A0PJX4 238 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 C9orf170A2RU37 121 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 SMCO3A2RU48 225 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 HMSDA8MTL9 139 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 CEBPZOSA8MTT3 80 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 HSD17B6O14756 317 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 SOCS1O15524 211 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 NME2P1O60361 137 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 ZIC3O60481 467 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 FBXO24O75426 580 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 TUSC2O75896 110 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 PRF1P14222 555 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 NME2P22392 152 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 MST1P26927 711 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 PPT1P50897 306 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 EDDM3BP56851 147 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 PPP1R1AQ13522 171 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 NRN1LQ496H8 165 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 SPATA46Q5T0L3 261 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 C11orf87Q6NUJ2 197 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF529Q6P280 563 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 HSD17B13Q7Z5P4 300 aaPredicted RBP4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 BATF2Q8N1L9 274 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 BVESQ8NE79 360 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 OR10Z1Q8NGY1 313 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 OR14K1Q8NGZ2 314 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNRF4Q8WWF5 429 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 EDARADDQ8WWZ3 215 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 USB1Q9BQ65 265 aaKnown RBP4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 KCNK15Q9H427 330 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 TMEM231Q9H6L2 316 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 SLC7A10Q9NS82 523 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 CACFD1Q9UGQ2 172 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 IL17BQ9UHF5 180 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 ANXA10Q9UJ72 324 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 SDK2Q58EX2 2172 aa4.65□□□□□ -1.66
SMNDC1-202ENST00000369603 A0A0G2JK05 382 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 LOC101059948A0A1B0GTJ6 334 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 TMEM30CPA0ZSE6 113 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 LYZL6O75951 148 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 HOXD4P09016 255 aaPredicted RBP4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 TUBG1P23258 451 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 CA6P23280 308 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 RPS11P62280 158 aaKnown RBP eCLIP4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 LINC00596Q86U02 117 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 ZNF75AQ96N20 296 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 HINT2Q9BX68 163 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 MRPL13Q9BYD1 178 aaKnown RBP4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 RTN4RQ9BZR6 473 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 TUBG2Q9NRH3 451 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 LAMP3Q9UQV4 416 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 TP53TG5Q9Y2B4 290 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 CLDN16Q9Y5I7 305 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 AHRRA9YTQ3 701 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 B3GALNT1O75752 331 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 MPC2O95563 127 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 CTSDP07339 412 aaPredicted RBP4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 ADRA2AP08913 450 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 EDDM3AQ14507 147 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 ZNF273Q14593 569 aa4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 ATPAF1Q5TC12 328 aaPredicted RBP4.65□□□□□ -1.67
SMNDC1-202ENST00000369603 TMEM268Q5VZI3 342 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms