RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 OR5AC2Q9NZP5 309 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 CACFD1Q9UGQ2 172 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 EDARQ9UNE0 448 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 STRAPQ9Y3F4 350 aaKnown RBP10.06□□□□□ -0.8
USF1-201ENST00000368019 POLQO75417 2590 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 IGLV3-12A0A075B6K2 115 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 IGLV3-32A0A0A0MS00 114 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 MED6O75586 246 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 MPZL1O95297 269 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 MPIG6BO95866 241 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 ACAA1P09110 424 aaPredicted RBP10.05□□□□□ -0.8
USF1-201ENST00000368019 NAT2P11245 290 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 THBS4P35443 961 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 PTGFRP43088 359 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 LPAR6P43657 344 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 OR3A2P47893 321 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 AKR1C2P52895 323 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 GRB2P62993 217 aaKnown RBP10.05□□□□□ -0.8
USF1-201ENST00000368019 AKR1C1Q04828 323 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 MFAP5Q13361 173 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 RHEBQ15382 184 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 ANKRD55Q3KP44 614 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 SLC22A6Q4U2R8 563 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 AADACL3Q5VUY0 350 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 SHISA6Q6ZSJ9 500 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 SLC16A14Q7RTX9 510 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 LINC00346Q8IVM7 164 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 PRR22Q8IZ63 422 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 FAM71E2Q8N5Q1 922 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 OR10S1Q8NGN2 331 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 OR13G1Q8NGZ3 307 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 STT3BQ8TCJ2 826 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 PSMF1Q92530 271 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 TSLPQ969D9 159 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 TMEM41AQ96HV5 264 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 THOC3Q96J01 351 aaKnown RBP10.05□□□□□ -0.8
USF1-201ENST00000368019 FOXN4Q96NZ1 517 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 CMSS1Q9BQ75 279 aaKnown RBP10.05□□□□□ -0.8
USF1-201ENST00000368019 SULT4A1Q9BR01 284 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 PTGES2Q9H7Z7 377 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 FAM212BQ9NTI7 297 aaPredicted RBP10.05□□□□□ -0.8
USF1-201ENST00000368019 CSMD1Q96PZ7 3565 aa10.05□□□□□ -0.8
USF1-201ENST00000368019 CELSR1Q9NYQ6 3014 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 LOC100509620A0A075B734 347 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 LOC102725191A0A1B0GVB3 256 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 LIPT2A6NK58 231 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 SMAD9O15198 467 aaKnown RBP10.04□□□□□ -0.8
USF1-201ENST00000368019 DEDDO75618 318 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 ADAP1O75689 374 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 EIF3GO75821 320 aaKnown RBP eCLIP10.04□□□□□ -0.8
USF1-201ENST00000368019 IFNA2P01563 188 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 IFNA21P01568 189 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 ZNF708P17019 499 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 LMO1P25800 156 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 FKBP2P26885 142 aaKnown RBP10.04□□□□□ -0.8
USF1-201ENST00000368019 RPL12P30050 165 aaKnown RBP10.04□□□□□ -0.8
USF1-201ENST00000368019 RBMXP38159 391 aaKnown RBP10.04□□□□□ -0.8
USF1-201ENST00000368019 GLP1RP43220 463 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 TMEM50BP56557 158 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 FMODQ06828 376 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 ARFRP1Q13795 201 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 SLC9A3R2Q15599 337 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 SLC25A47Q6Q0C1 308 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 HIST2H3AQ71DI3 136 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 C1QL4Q86Z23 238 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 LRTM2Q8N967 370 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 NOXO1Q8NFA2 376 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 OR2AJ1Q8NGZ0 328 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 FNDC9Q8TBE3 224 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 RELTQ969Z4 430 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 HIST1H2BAQ96A08 127 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 ARL5BQ96KC2 179 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 OR10C1Q96KK4 312 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 MRGPRX4Q96LA9 322 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 NKX3-1Q99801 234 aaPredicted RBP10.04□□□□□ -0.8
USF1-201ENST00000368019 NICN1Q9BSH3 213 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 ADAT1Q9BUB4 502 aaKnown RBP10.04□□□□□ -0.8
USF1-201ENST00000368019 OR11A1Q9GZK7 315 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 HRH4Q9H3N8 390 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 ZNF304Q9HCX3 659 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 GTF3C1Q12789 2109 aa10.04□□□□□ -0.8
USF1-201ENST00000368019 ANKRD17O75179 2603 aaKnown RBP10.03□□□□□ -0.8
USF1-201ENST00000368019 NCOA6Q14686 2063 aaPredicted RBP10.03□□□□□ -0.8
USF1-201ENST00000368019 BORCS7-ASMTA0A0B4J1R7 106 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 OR2W5A6NFC9 320 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 E5RGE8 158 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 K7EPK0 472 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 SOCS1O15524 211 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 ZG16O60844 167 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 FARS2O95363 451 aaKnown RBP10.03□□□□□ -0.8
USF1-201ENST00000368019 GLAP06280 429 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 HLA-DOBP13765 273 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 FBLP22087 321 aaKnown RBP10.03□□□□□ -0.8
USF1-201ENST00000368019 CPT2P23786 658 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 S100PP25815 95 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 KCNJ3P48549 501 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 NPY4RP50391 375 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 TDGF1P3P51864 188 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 ZNF133P52736 654 aaPredicted RBP10.03□□□□□ -0.8
USF1-201ENST00000368019 POU3F1Q03052 451 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms