RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 PACRGQ96M98 296 aaPredicted RBP17.23■□□□□ 0.35
TRIM58-201ENST00000366481 CCNL2Q96S94 520 aaPredicted RBP17.23■□□□□ 0.35
TRIM58-201ENST00000366481 LIPGQ9Y5X9 500 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 E5RGE8 158 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 TNFSF12O43508 249 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 GDF9O60383 454 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 TIAF1O95411 115 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 SEC11BP0C7V7 166 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 GABRR1P24046 479 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 PHLDA2Q53GA4 152 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 MUCL1Q96DR8 90 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 NIPSNAP3BQ9BS92 247 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 FSCN3Q9NQT6 498 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 NSG2Q9Y328 171 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 H3BMH7 237 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 CCL20P78556 96 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 HIST2H3PS2Q5TEC6 136 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 FBXW12Q6X9E4 464 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 TDHQ8IZJ6 230 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 SUMF1Q8NBK3 374 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 WFDC1Q9HC57 220 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 MTCH2Q9Y6C9 303 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 ZNF850A8MQ14 1090 aa17.22■□□□□ 0.35
TRIM58-201ENST00000366481 SCAF4O95104 1147 aaKnown RBP17.22■□□□□ 0.35
TRIM58-201ENST00000366481 PI4KAP42356 2102 aa17.22■□□□□ 0.35
TRIM58-201ENST00000366481 MYO7BQ6PIF6 2116 aa17.22■□□□□ 0.35
TRIM58-201ENST00000366481 OGFOD3Q6PK18 319 aa17.22■□□□□ 0.35
TRIM58-201ENST00000366481 ATG101Q9BSB4 218 aa17.22■□□□□ 0.35
TRIM58-201ENST00000366481 A0A1W2PR77 199 aa17.22■□□□□ 0.35
TRIM58-201ENST00000366481 C5orf63A6NC05 138 aa17.22■□□□□ 0.35
TRIM58-201ENST00000366481 RBFOX3A6NFN3 312 aa17.22■□□□□ 0.35
TRIM58-201ENST00000366481 ZNF724A8MTY0 619 aa17.22■□□□□ 0.35
TRIM58-201ENST00000366481 FTCDNL1E5RQL4 147 aa17.22■□□□□ 0.35
TRIM58-201ENST00000366481 MBPP02686 304 aaPredicted RBP17.22■□□□□ 0.35
TRIM58-201ENST00000366481 SNRPCP09234 159 aaKnown RBP17.22■□□□□ 0.35
TRIM58-201ENST00000366481 CD27P26842 260 aa17.22■□□□□ 0.35
TRIM58-201ENST00000366481 LSM6P62312 80 aaKnown RBP17.22■□□□□ 0.35
TRIM58-201ENST00000366481 C1QL4Q86Z23 238 aa17.22■□□□□ 0.35
TRIM58-201ENST00000366481 TMEM131Q92545 1883 aa17.21■□□□□ 0.35
TRIM58-201ENST00000366481 TMEM14DPA8MWL7 114 aa17.21■□□□□ 0.35
TRIM58-201ENST00000366481 LMO7DNF2Z398 122 aa17.21■□□□□ 0.35
TRIM58-201ENST00000366481 EFNA2O43921 213 aa17.21■□□□□ 0.35
TRIM58-201ENST00000366481 THBS4P35443 961 aa17.21■□□□□ 0.35
TRIM58-201ENST00000366481 ERVFRD-1P60508 538 aa17.21■□□□□ 0.35
TRIM58-201ENST00000366481 COL13A1Q5TAT6 717 aaPredicted RBP17.21■□□□□ 0.35
TRIM58-201ENST00000366481 MEX3BQ6ZN04 569 aaKnown RBP17.21■□□□□ 0.35
TRIM58-201ENST00000366481 ASB10Q8WXI3 467 aa17.21■□□□□ 0.35
TRIM58-201ENST00000366481 ZNF775Q96BV0 537 aaPredicted RBP17.21■□□□□ 0.35
TRIM58-201ENST00000366481 ABHD14AQ9BUJ0 271 aa17.21■□□□□ 0.35
TRIM58-201ENST00000366481 AKIRIN1Q9H9L7 192 aaPredicted RBP17.21■□□□□ 0.35
TRIM58-201ENST00000366481 HS3ST3B1Q9Y662 390 aa17.21■□□□□ 0.35
TRIM58-201ENST00000366481 RER1O15258 196 aa17.21■□□□□ 0.35
TRIM58-201ENST00000366481 ISG15P05161 165 aa17.21■□□□□ 0.35
TRIM58-201ENST00000366481 TRGC1P0CF51 173 aa17.21■□□□□ 0.35
TRIM58-201ENST00000366481 PADI1Q9ULC6 663 aa17.21■□□□□ 0.35
TRIM58-201ENST00000366481 TUBG1P23258 451 aa17.21■□□□□ 0.34
TRIM58-201ENST00000366481 PIGPP57054 158 aa17.21■□□□□ 0.34
TRIM58-201ENST00000366481 HNRNPKP61978 463 aaKnown RBP eCLIP17.21■□□□□ 0.34
TRIM58-201ENST00000366481 QRFPP83859 136 aa17.21■□□□□ 0.34
TRIM58-201ENST00000366481 PRAMEF20Q5VT98 475 aa17.21■□□□□ 0.34
TRIM58-201ENST00000366481 H1FNTQ75WM6 255 aaPredicted RBP17.21■□□□□ 0.34
TRIM58-201ENST00000366481 STRAPQ9Y3F4 350 aaKnown RBP17.21■□□□□ 0.34
TRIM58-201ENST00000366481 ZNF814B7Z6K7 855 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 TMEM225BP0DP42 221 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 P2RY1P47900 373 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 ELOBQ15370 118 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 OR8G1Q15617 311 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 LYZL2Q7Z4W2 148 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 OR5L1Q8NGL2 311 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 OR10S1Q8NGN2 331 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 GALNT14Q96FL9 552 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 GPR84Q9NQS5 396 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 ZNF319Q9P2F9 582 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 AK3Q9UIJ7 227 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 NXT1Q9UKK6 140 aaKnown RBP17.2■□□□□ 0.34
TRIM58-201ENST00000366481 CNOT1A5YKK6 2376 aaKnown RBP17.2■□□□□ 0.34
TRIM58-201ENST00000366481 TRBV11-1A0A0K0K1C0 115 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 A0A1B0GX78 115 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 GNMTQ14749 295 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 CYB561D1Q8N8Q1 229 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 LFNGQ8NES3 379 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 OR10AD1Q8NGE0 317 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 OR2AJ1Q8NGZ0 328 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 HAS2Q92819 552 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 PLEKHJ1Q9NW61 149 aa17.2■□□□□ 0.34
TRIM58-201ENST00000366481 G3V3Y1 287 aa17.19■□□□□ 0.34
TRIM58-201ENST00000366481 GEMIN2O14893 280 aaKnown RBP17.19■□□□□ 0.34
TRIM58-201ENST00000366481 OPRM1P35372 400 aa17.19■□□□□ 0.34
TRIM58-201ENST00000366481 HIST3H2BBQ8N257 126 aa17.19■□□□□ 0.34
TRIM58-201ENST00000366481 KDF1Q8NAX2 398 aaPredicted RBP17.19■□□□□ 0.34
TRIM58-201ENST00000366481 OSGIN2Q9Y236 505 aa17.19■□□□□ 0.34
TRIM58-201ENST00000366481 SRSF10O75494 262 aaKnown RBP17.19■□□□□ 0.34
TRIM58-201ENST00000366481 HDHD3Q9BSH5 251 aaPredicted RBP17.19■□□□□ 0.34
TRIM58-201ENST00000366481 SLC7A11Q9UPY5 501 aa17.19■□□□□ 0.34
TRIM58-201ENST00000366481 NR2C1P13056 603 aa17.19■□□□□ 0.34
TRIM58-201ENST00000366481 DCAF7P61962 342 aa17.19■□□□□ 0.34
TRIM58-201ENST00000366481 SYT13Q7L8C5 426 aa17.19■□□□□ 0.34
TRIM58-201ENST00000366481 SLC25A45Q8N413 288 aa17.19■□□□□ 0.34
TRIM58-201ENST00000366481 TMEM217Q8N7C4 229 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms