RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 ARV1Q9H2C2 271 aa-0.32□□□□□ -2.46
RNU4-40P-201ENST00000364351 LRRC40Q9H9A6 602 aa-0.32□□□□□ -2.46
RNU4-40P-201ENST00000364351 RBM22Q9NW64 420 aaKnown RBP eCLIP-0.32□□□□□ -2.46
RNU4-40P-201ENST00000364351 ANKRD17O75179 2603 aaKnown RBP-0.32□□□□□ -2.46
RNU4-40P-201ENST00000364351 TRPM3Q9HCF6 1732 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 CACNA1SQ13698 1873 aa-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 MROH7Q68CQ1 1323 aa-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 CCNB2O95067 398 aa-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 GUCA1CO95843 209 aa-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 PAX6P26367 422 aa-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 MRPL19P49406 292 aaKnown RBP-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 PSMB2P49721 201 aa-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 RPL10AP62906 217 aaKnown RBP-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 ZCCHC7Q8N3Z6 543 aaKnown RBP-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 UCK2Q9BZX2 261 aa-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 SLC7A5P2Q9GIP4 190 aa-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 PITPNC1Q9UKF7 332 aa-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 ZNF706Q9Y5V0 76 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 PLEKHG2Q9H7P9 1386 aa-0.33□□□□□ -2.46
RNU4-40P-201ENST00000364351 IGKV3-7A0A075B6H7 116 aa-0.34□□□□□ -2.46
RNU4-40P-201ENST00000364351 IGKV2D-26A0A0A0MRZ7 120 aa-0.34□□□□□ -2.46
RNU4-40P-201ENST00000364351 ZNF705DP0CH99 300 aaPredicted RBP-0.34□□□□□ -2.46
RNU4-40P-201ENST00000364351 ZNF705BP0CI00 300 aaPredicted RBP-0.34□□□□□ -2.46
RNU4-40P-201ENST00000364351 MTPNP58546 118 aa-0.34□□□□□ -2.46
RNU4-40P-201ENST00000364351 TAF7Q15545 349 aaPredicted RBP-0.34□□□□□ -2.46
RNU4-40P-201ENST00000364351 NT5C3BQ969T7 300 aa-0.34□□□□□ -2.46
RNU4-40P-201ENST00000364351 RCN3Q96D15 328 aa-0.34□□□□□ -2.46
RNU4-40P-201ENST00000364351 ZBTB18Q99592 522 aa-0.34□□□□□ -2.46
RNU4-40P-201ENST00000364351 URGCP-MRPS24S4R325 110 aa-0.34□□□□□ -2.46
RNU4-40P-201ENST00000364351 ZFHX2Q9C0A1 2572 aaPredicted RBP-0.34□□□□□ -2.46
RNU4-40P-201ENST00000364351 TRPM6Q9BX84 2022 aa-0.35□□□□□ -2.46
RNU4-40P-201ENST00000364351 NDUFS5O43920 106 aa-0.35□□□□□ -2.47
RNU4-40P-201ENST00000364351 IL9P15248 144 aa-0.35□□□□□ -2.47
RNU4-40P-201ENST00000364351 IMPA1P29218 277 aa-0.35□□□□□ -2.47
RNU4-40P-201ENST00000364351 FAM9BQ8IZU0 186 aa-0.35□□□□□ -2.47
RNU4-40P-201ENST00000364351 FAM184AQ8NB25 1140 aa-0.35□□□□□ -2.47
RNU4-40P-201ENST00000364351 OR4A5Q8NH83 315 aa-0.35□□□□□ -2.47
RNU4-40P-201ENST00000364351 ELMO1Q92556 727 aa-0.35□□□□□ -2.47
RNU4-40P-201ENST00000364351 ZNF514Q96K75 400 aaPredicted RBP-0.35□□□□□ -2.47
RNU4-40P-201ENST00000364351 CAPZA3Q96KX2 299 aa-0.35□□□□□ -2.47
RNU4-40P-201ENST00000364351 BABAM2Q9NXR7 383 aa-0.35□□□□□ -2.47
RNU4-40P-201ENST00000364351 VAX2Q9UIW0 290 aa-0.35□□□□□ -2.47
RNU4-40P-201ENST00000364351 CEP170Q5SW79 1584 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 LECT2O14960 151 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 GBX2P52951 348 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 PMVKQ15126 192 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 SSX1Q16384 188 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 SSX2Q16385 188 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 CDC37Q16543 378 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 DPPA2Q7Z7J5 298 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 SLC7A5P1Q8MH63 180 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 LINC00337Q8N6G1 96 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 CYB561A3Q8NBI2 242 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 TMBIM1Q969X1 311 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 SCGB3A2Q96PL1 93 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 SPACA5Q96QH8 159 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 GABRG3Q99928 467 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 SLC23A2Q9UGH3 650 aa-0.36□□□□□ -2.47
RNU4-40P-201ENST00000364351 TRBV11-1A0A0K0K1C0 115 aa-0.37□□□□□ -2.47
RNU4-40P-201ENST00000364351 ARRDC5A6NEK1 342 aa-0.37□□□□□ -2.47
RNU4-40P-201ENST00000364351 PSKH1P11801 424 aa-0.37□□□□□ -2.47
RNU4-40P-201ENST00000364351 TIMM23BQ5SRD1 257 aa-0.37□□□□□ -2.47
RNU4-40P-201ENST00000364351 C10orf91Q5T1B1 145 aa-0.37□□□□□ -2.47
RNU4-40P-201ENST00000364351 CYP4Z2PQ8N1L4 340 aa-0.37□□□□□ -2.47
RNU4-40P-201ENST00000364351 MAL2Q969L2 176 aa-0.37□□□□□ -2.47
RNU4-40P-201ENST00000364351 REEP1Q9H902 201 aa-0.37□□□□□ -2.47
RNU4-40P-201ENST00000364351 LOC102725191A0A1B0GVB3 256 aa-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 UPK1AO00322 258 aa-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 GPR75O95800 540 aa-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 XKP51811 444 aa-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 UBE2MP61081 183 aaKnown RBP-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 LAMTOR4Q0VGL1 99 aa-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 HSDL1Q3SXM5 330 aa-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 ZNF773Q6PK81 442 aa-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 UNQ6190/PRO20217Q6UXQ8 127 aa-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 OR6K6Q8NGW6 343 aa-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 HIST1H2BAQ96A08 127 aa-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 VPS37BQ9H9H4 285 aa-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 FBXL3Q9UKT7 428 aa-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 MINOS1-NBL1R4GNA1 71 aa-0.38□□□□□ -2.47
RNU4-40P-201ENST00000364351 EEF1E1O43324 174 aaKnown RBP-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 TDP2O95551 362 aa-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 GTF2E2P29084 291 aaKnown RBP-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 CRABP1P29762 137 aa-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 PEBP1P30086 187 aaKnown RBP-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 INPP1P49441 399 aa-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 LINC00596Q86U02 117 aa-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 BBS5Q8N3I7 341 aa-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 ZIC4Q8N9L1 334 aa-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 SPACA4Q8TDM5 124 aa-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 RNF133Q8WVZ7 376 aa-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 Q9BRP9 147 aa-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 PRO0628Q9UI54 55 aa-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 C22orf24Q9Y442 160 aa-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 INSIG2Q9Y5U4 225 aa-0.39□□□□□ -2.47
RNU4-40P-201ENST00000364351 LSM1O15116 133 aaKnown RBP-0.4□□□□□ -2.47
RNU4-40P-201ENST00000364351 RHOCP08134 193 aa-0.4□□□□□ -2.47
RNU4-40P-201ENST00000364351 GABRA1P14867 456 aa-0.4□□□□□ -2.47
RNU4-40P-201ENST00000364351 ZMYND11Q15326 602 aa-0.4□□□□□ -2.47
RNU4-40P-201ENST00000364351 OR4K2Q8NGD2 314 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms