RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 ZNF141Q15928 474 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 FBXW9Q5XUX1 488 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 TMEM229BQ8NBD8 167 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 COX14Q96I36 57 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 SLC17A5Q9NRA2 495 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 SLC25A37Q9NYZ2 338 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 PITPNC1Q9UKF7 332 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 PDGFAP04085 211 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 CD3DP04234 171 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 RPUSD3Q6P087 351 aaKnown RBP9.72□□□□□ -0.85
CLIP1-203ENST00000361654 ETV3LQ6ZN32 361 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 UBALD1Q8TB05 177 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 ZNF416Q9BWM5 594 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 PARP12Q9H0J9 701 aaKnown RBP9.72□□□□□ -0.85
CLIP1-203ENST00000361654 SLC25A22Q9H936 323 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 BTAF1O14981 1849 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 SLX4Q8IY92 1834 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 IGHV3-43A0A0B4J1X8 118 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 LOC102723971A0A1B0GUV8 181 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 UMAD1C9J7I0 102 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 B4GALT3O60512 393 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 IGHV3-43DP0DP04 118 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 ERVFC1-1P60608 527 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 DGCR2P98153 550 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 C19orf48Q6RUI8 117 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 LINC00299Q6ZSB3 139 aa9.72□□□□□ -0.85
CLIP1-203ENST00000361654 TMEM210A6NLX4 147 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 PLPP3O14495 311 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 ADAM11O75078 769 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 OR4E1P0C645 316 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 ACSM4P0C7M7 580 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 SP9P0CG40 484 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 CCL2P13500 99 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 ACP1P24666 158 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 LSM6P62312 80 aaKnown RBP9.71□□□□□ -0.85
CLIP1-203ENST00000361654 C3AR1Q16581 482 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 TMEM128Q5BJH2 165 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 OTPQ5XKR4 325 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 URGCP-MRPS24S4R325 110 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 MYO7AQ13402 2215 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 J3QR89 54 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 PRR35P0CG20 571 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 CDC20Q12834 499 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 OR5M8Q8NGP6 311 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 MAP6Q96JE9 813 aa9.71□□□□□ -0.85
CLIP1-203ENST00000361654 AKAP11Q9UKA4 1901 aa9.71□□□□□ -0.86
CLIP1-203ENST00000361654 AKR7A2O43488 359 aa9.71□□□□□ -0.86
CLIP1-203ENST00000361654 ATP5J2P56134 94 aa9.71□□□□□ -0.86
CLIP1-203ENST00000361654 NCR3LG1Q68D85 454 aa9.71□□□□□ -0.86
CLIP1-203ENST00000361654 ASB1Q9Y576 335 aa9.71□□□□□ -0.86
CLIP1-203ENST00000361654 ARL2-SNX15V9GYD0 113 aa9.71□□□□□ -0.86
CLIP1-203ENST00000361654 TPRP12270 2363 aaKnown RBP9.71□□□□□ -0.86
CLIP1-203ENST00000361654 CD37P11049 281 aa9.71□□□□□ -0.86
CLIP1-203ENST00000361654 TGFBR1P36897 503 aa9.71□□□□□ -0.86
CLIP1-203ENST00000361654 MLF1P58340 268 aa9.71□□□□□ -0.86
CLIP1-203ENST00000361654 GUCA2BQ16661 112 aa9.71□□□□□ -0.86
CLIP1-203ENST00000361654 SLC7A10Q9NS82 523 aa9.71□□□□□ -0.86
CLIP1-203ENST00000361654 HTN1P15515 57 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 COL19A1Q14993 1142 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 LINC01555Q8NAE3 123 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 OR5AP2Q8NGF4 316 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 OR13C5Q8NGS8 318 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 ZNF764Q96H86 408 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-203ENST00000361654 SNRPGP15A8MWD9 76 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 OR2C1O95371 312 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 HIST1H1EP10412 219 aaKnown RBP9.7□□□□□ -0.86
CLIP1-203ENST00000361654 ISL1P61371 349 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 TMEM215Q68D42 235 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 OR4A4PQ8NGN8 299 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 KCNE3Q9Y6H6 103 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 H3BP45 60 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 CBR1P16152 277 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 TPPP2P59282 170 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 GPNMBQ14956 572 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 RRN3P1Q2M238 152 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 C20orf196Q8IYI0 205 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 OR8I2Q8N0Y5 310 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 FLYWCH2Q96CP2 140 aaKnown RBP9.7□□□□□ -0.86
CLIP1-203ENST00000361654 SIGLEC7Q9Y286 467 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 GPANK1O95872 356 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 HAND1O96004 215 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 TRAPPC2P0DI81 140 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 TRAPPC2BP0DI82 140 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 ORM2P19652 201 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 SLC38A11Q08AI6 406 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 ATP6V1FQ16864 119 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 ECSCRQ19T08 205 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 C16orf47Q6ZP98 133 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-203ENST00000361654 NTNG2Q96CW9 530 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 C10orf35Q96D05 121 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 FOXD3Q9UJU5 478 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-203ENST00000361654 TINAGQ9UJW2 476 aa9.7□□□□□ -0.86
CLIP1-203ENST00000361654 MMP7P09237 267 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-203ENST00000361654 SPNP16150 400 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 G0S2P27469 103 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 LOXL3P58215 753 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 LSM11P83369 360 aaKnown RBP eCLIP9.69□□□□□ -0.86
CLIP1-203ENST00000361654 FAM209AQ5JX71 171 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 SIGIRRQ6IA17 410 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 SP7Q8TDD2 431 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms