RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 H0Y8G0 127 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 RBP4P02753 201 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 BGLAPP02818 100 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 SFTPCP11686 197 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 FBXW9Q5XUX1 488 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 XAF1Q6GPH4 301 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 PILRAQ9UKJ1 303 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 ICAM5Q9UMF0 924 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 CTAG2O75638 210 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 FOSL1P15407 271 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 COX5AP20674 150 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 FGF7P21781 194 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 TMEM41BQ5BJD5 291 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 ZNF441Q8N8Z8 693 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 HES4Q9HCC6 221 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 TRBV5-3A0A0A0MS03 114 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 HRASP01112 189 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 MT-ND4LP03901 98 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 Q56UQ5 140 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 PXDC1Q5TGL8 231 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 WDR89Q96FK6 387 aaPredicted RBP16.39■□□□□ 0.21
CLIP2-202ENST00000361545 GMPPAQ96IJ6 420 aaPredicted RBP16.39■□□□□ 0.21
CLIP2-202ENST00000361545 ALX3O95076 343 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 KDF1Q8NAX2 398 aaPredicted RBP16.39■□□□□ 0.21
CLIP2-202ENST00000361545 LPAR6P43657 344 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 HLXQ14774 488 aaPredicted RBP16.39■□□□□ 0.21
CLIP2-202ENST00000361545 OR2T6Q8NHC8 308 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 MISP3Q96FF7 219 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 AKIP1Q9NQ31 210 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 SLC17A5Q9NRA2 495 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 MDH2P40926 338 aaKnown RBP16.39■□□□□ 0.21
CLIP2-202ENST00000361545 PRRX1P54821 245 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 BAGE3Q86Y29 109 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 BAGE2Q86Y30 109 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 DDA1Q9BW61 102 aa16.39■□□□□ 0.21
CLIP2-202ENST00000361545 A0A0J9YW62 118 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 UBE2L5PA0A1B0GUS4 154 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 ONECUT2O95948 504 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 OPN1MWP04001 364 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 TRAPPC2P0DI81 140 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 TRAPPC2BP0DI82 140 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 OPN1MW2P0DN77 364 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 OPN1MW3P0DN78 364 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 RAB5CP51148 216 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 PIK3IP1Q96FE7 263 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 TMEM56Q96MV1 263 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 TMEM38BQ9NVV0 291 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 GAB2Q9UQC2 676 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 A0A1W2PQM1 296 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 ATP1A1-AS1Q5TC04 95 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 NHLRC1Q6VVB1 395 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 TMEM251Q8N6I4 163 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 SLC25A40Q8TBP6 338 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 RBPMSQ93062 196 aaKnown RBP16.38■□□□□ 0.21
CLIP2-202ENST00000361545 RPUSD4Q96CM3 377 aaKnown RBP16.38■□□□□ 0.21
CLIP2-202ENST00000361545 MSL2Q9HCI7 577 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 IL36GQ9NZH8 169 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 FGF5P12034 268 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 FPR2P25090 351 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 INPP5JQ15735 1006 aaPredicted RBP16.38■□□□□ 0.21
CLIP2-202ENST00000361545 ICE1Q9Y2F5 2266 aa16.38■□□□□ 0.21
CLIP2-202ENST00000361545 C1QCP02747 245 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 KCNJ3P48549 501 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 RELL2Q8NC24 303 aaPredicted RBP16.37■□□□□ 0.21
CLIP2-202ENST00000361545 TIMM9Q9Y5J7 89 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 CD80P33681 288 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 TMPRSS3P57727 454 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 PLPPR5Q32ZL2 321 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 ZNF787Q6DD87 383 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 HGDQ93099 445 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 NDFIP1Q9BT67 221 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 FRRS1LQ9P0K9 344 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 NPIPB8E9PQR5 432 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 PNPP00491 289 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 ZNF17P17021 662 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 RAB7AP51149 207 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 CCDC190Q86UF4 302 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 SLC25A32Q9H2D1 315 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 TLE1Q04724 770 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 SPINK9Q5DT21 86 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 MDP1Q86V88 176 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 OR8B3Q8NGG8 313 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 OR8B2Q96RD0 313 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 TMEM231Q9H6L2 316 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 LPAR2Q9HBW0 351 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 OR6C3Q9NZP0 311 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 CACFD1Q9UGQ2 172 aa16.37■□□□□ 0.21
CLIP2-202ENST00000361545 CTSBP07858 339 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 OPRK1P41145 380 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 ZFP36L2P47974 494 aaKnown RBP16.36■□□□□ 0.21
CLIP2-202ENST00000361545 TSPO2Q5TGU0 170 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 TRAT1Q6PIZ9 186 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 HIST2H3AQ71DI3 136 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 ZNFX1Q9P2E3 1918 aaKnown RBP16.36■□□□□ 0.21
CLIP2-202ENST00000361545 NINQ8N4C6 2090 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 ARID1AO14497 2285 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 WISP3O95389 354 aaPredicted RBP16.36■□□□□ 0.21
CLIP2-202ENST00000361545 SLC25A4P12235 298 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 C1orf185Q5T7R7 199 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 GVQW1Q8N7I0 195 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms