RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 GCNT2Q8N0V5 402 aa14.4□□□□□ -0.1
SCAF1-201ENST00000360565 MFRPQ9BY79 579 aa14.4□□□□□ -0.1
SCAF1-201ENST00000360565 DUSP15Q9H1R2 295 aaPredicted RBP14.4□□□□□ -0.1
SCAF1-201ENST00000360565 MMP26Q9NRE1 261 aa14.4□□□□□ -0.1
SCAF1-201ENST00000360565 LIN7CQ9NUP9 197 aaKnown RBP14.4□□□□□ -0.1
SCAF1-201ENST00000360565 ERRFI1Q9UJM3 462 aaPredicted RBP14.4□□□□□ -0.1
SCAF1-201ENST00000360565 CCDC187A0A096LP49 1063 aa14.4□□□□□ -0.11
SCAF1-201ENST00000360565 A0A1W2PR80 420 aa14.4□□□□□ -0.11
SCAF1-201ENST00000360565 TGFBR3LH3BV60 316 aa14.4□□□□□ -0.11
SCAF1-201ENST00000360565 PPP1R2P9O14990 202 aa14.4□□□□□ -0.11
SCAF1-201ENST00000360565 TMEM33P57088 247 aa14.4□□□□□ -0.11
SCAF1-201ENST00000360565 IGLV3-21P80748 117 aaPredicted RBP14.4□□□□□ -0.11
SCAF1-201ENST00000360565 ZNF239Q16600 458 aaKnown RBP14.4□□□□□ -0.11
SCAF1-201ENST00000360565 GUK1Q16774 197 aa14.4□□□□□ -0.11
SCAF1-201ENST00000360565 ZNF658BQ4V348 819 aaPredicted RBP14.4□□□□□ -0.11
SCAF1-201ENST00000360565 KCNIP4Q6PIL6 250 aa14.4□□□□□ -0.11
SCAF1-201ENST00000360565 OR1J1Q8NGS3 322 aa14.4□□□□□ -0.11
SCAF1-201ENST00000360565 HPSE2Q8WWQ2 592 aa14.4□□□□□ -0.11
SCAF1-201ENST00000360565 MTCL1Q9Y4B5 1905 aaKnown RBP14.39□□□□□ -0.11
SCAF1-201ENST00000360565 TRBV5-7A0A0A0MS05 114 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 CA6P23280 308 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 ZP4Q12836 540 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 SSPNQ14714 243 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 SARAFQ96BY9 339 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 TRAF4Q9BUZ4 470 aaPredicted RBP14.39□□□□□ -0.11
SCAF1-201ENST00000360565 MS4A7Q9GZW8 240 aaPredicted RBP14.39□□□□□ -0.11
SCAF1-201ENST00000360565 TRGV5A0A0B4J1U4 118 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 MEX3AA1L020 520 aaKnown RBP14.39□□□□□ -0.11
SCAF1-201ENST00000360565 SELEP16581 610 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 C19orf57Q0VDD7 668 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 NR2C2APQ86WQ0 139 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 PSENENQ9NZ42 101 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 TCFL5Q9UL49 500 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 GEMIN2O14893 280 aaKnown RBP14.39□□□□□ -0.11
SCAF1-201ENST00000360565 CLEC9AQ6UXN8 241 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 ZADH2Q8N4Q0 377 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 GAB2Q9UQC2 676 aa14.39□□□□□ -0.11
SCAF1-201ENST00000360565 A0A0B4J293 547 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 A0A0G2JK05 382 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 ZNF727A8MUV8 499 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 CELA2AP08217 269 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 ROS1P08922 2347 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 OR6S1Q8NH40 331 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 NPIPB9F8W1W9 429 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 FSTP19883 344 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 ZNF362Q5T0B9 420 aaPredicted RBP14.38□□□□□ -0.11
SCAF1-201ENST00000360565 KCNK17Q96T54 332 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 EDEM2Q9BV94 578 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 C19orf12Q9NSK7 152 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 NDRG3Q9UGV2 375 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 GOLGB1Q14789 3259 aaKnown RBP14.38□□□□□ -0.11
SCAF1-201ENST00000360565 FAM24AA6NFZ4 105 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 CXorf67Q86X51 503 aaPredicted RBP14.38□□□□□ -0.11
SCAF1-201ENST00000360565 OR10P1Q8NGE3 313 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 PTX4Q96A99 478 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 RAB39BQ96DA2 213 aa14.38□□□□□ -0.11
SCAF1-201ENST00000360565 ADAM20O43506 726 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 KRASP01116 189 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 CTSDP07339 412 aaPredicted RBP14.37□□□□□ -0.11
SCAF1-201ENST00000360565 TUSC1Q2TAM9 212 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 HIST2H3AQ71DI3 136 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 MAFAQ8NHW3 353 aaPredicted RBP14.37□□□□□ -0.11
SCAF1-201ENST00000360565 M1APQ8TC57 530 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 ABHD3Q8WU67 409 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 PLPPR2Q96GM1 343 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 RASL12Q9NYN1 266 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 ZNF318Q5VUA4 2279 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 MS4A18H0YCH9 400 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 IGKV3-11P04433 115 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 SURF2Q15527 256 aaPredicted RBP14.37□□□□□ -0.11
SCAF1-201ENST00000360565 MS4A18Q3C1V0 323 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 ZNF718Q3SXZ3 478 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 ZNF787Q6DD87 383 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 FAM58AQ8N1B3 248 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 MRPS24Q96EL2 167 aaKnown RBP14.37□□□□□ -0.11
SCAF1-201ENST00000360565 SF3B5Q9BWJ5 86 aaKnown RBP14.37□□□□□ -0.11
SCAF1-201ENST00000360565 RAB33BQ9H082 229 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 CRYAAP02489 173 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 LIFP15018 202 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 MRPL41Q8IXM3 137 aaKnown RBP14.37□□□□□ -0.11
SCAF1-201ENST00000360565 RPUSD4Q96CM3 377 aaKnown RBP14.37□□□□□ -0.11
SCAF1-201ENST00000360565 MED9Q9NWA0 146 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 A0A0J9YW62 118 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 CLEC18AA5D8T8 446 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 CYB5BO43169 146 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 KCNAB3O43448 404 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 NMBP08949 121 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 PDZD11Q5EBL8 140 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 OR2C3Q8N628 320 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 CLEC18CQ8NCF0 446 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 CHST5Q9GZS9 411 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 ESRP2Q9H6T0 727 aaKnown RBP14.37□□□□□ -0.11
SCAF1-201ENST00000360565 TMEM9BQ9NQ34 198 aa14.37□□□□□ -0.11
SCAF1-201ENST00000360565 ZSWIM8A7E2V4 1837 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 DICER1Q9UPY3 1922 aaKnown RBP14.36□□□□□ -0.11
SCAF1-201ENST00000360565 C3orf85A0A1B0GTC6 90 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 H7BYZ3 331 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 SCAF4O95104 1147 aaKnown RBP14.36□□□□□ -0.11
SCAF1-201ENST00000360565 OR8U8P0C7N1 319 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 ACKR3P25106 362 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms