RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 LRRTM3Q86VH5 581 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 ARL17AQ8IVW1 177 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 MUC15Q8N387 334 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 MS4A6EQ96DS6 147 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 DOK1Q99704 481 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 DAPP1Q9UN19 280 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 KIR3DL2P43630 455 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 RNF165Q6ZSG1 346 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 NUFIP2Q7Z417 695 aaKnown RBP8.34□□□□□ -1.07
VPS13A-203ENST00000360280 RPS4Y2Q8TD47 263 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 H0YIG0 161 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 TSPAN12O95859 305 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 RPS19BP1Q86WX3 136 aaKnown RBP8.34□□□□□ -1.07
VPS13A-203ENST00000360280 OR2C3Q8N628 320 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 NRAPQ86VF7 1730 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 A0A096LPE4 126 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 A0A1W2PPZ6 126 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 FAHP16930 419 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 AFMIDQ63HM1 303 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 OR5B21A6NL26 309 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 AESQ08117 197 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 BADQ92934 168 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 C1QTNF6Q9BXI9 259 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 M0R296 226 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 ZNF788Q6ZQV5 615 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 ADTRPQ96IZ2 230 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 SMDT1Q9H4I9 107 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 DNAJC13O75165 2243 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 IFITM10A6NMD0 228 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 LGALS7P47929 136 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 CTF1Q16619 201 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 JMJD6Q6NYC1 403 aaPredicted RBP8.34□□□□□ -1.07
VPS13A-203ENST00000360280 KISS1RQ969F8 398 aaPredicted RBP8.34□□□□□ -1.07
VPS13A-203ENST00000360280 VN1R1Q9GZP7 353 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 LINC01387J3KSC0 135 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 FAHD1Q6P587 224 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 SARAFQ96BY9 339 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 CD1BP29016 333 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 MVB12AQ96EY5 273 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 WDR81Q562E7 1941 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 DHRS3O75911 302 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 LBX1P52954 281 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 MORN4Q8NDC4 146 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 DEFB108BQ8NET1 73 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 WDFY2Q96P53 400 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 CACNG5Q9UF02 275 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 ZNF865P0CJ78 1059 aaPredicted RBP8.33□□□□□ -1.08
VPS13A-203ENST00000360280 GNG3P63215 75 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 GLCCI1Q86VQ1 547 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 VSTM2AQ8TAG5 236 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 CA5BP1Q8WTZ4 195 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 KCPQ6ZWJ8 1503 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 CBR3O75828 277 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 ACTL6AO96019 429 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 HTRA3P83110 453 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 INSM1Q01101 510 aaPredicted RBP8.33□□□□□ -1.08
VPS13A-203ENST00000360280 KLRB1Q12918 225 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 C6orf15Q6UXA7 325 aaPredicted RBP8.33□□□□□ -1.08
VPS13A-203ENST00000360280 FUT9Q9Y231 359 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 SMCHD1A6NHR9 2005 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 LIMK1P53667 647 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 FOXO1Q12778 655 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 IL24Q13007 206 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 SLC39A5Q6ZMH5 540 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 YRDCQ86U90 279 aaKnown RBP8.33□□□□□ -1.08
VPS13A-203ENST00000360280 TMEM140Q9NV12 185 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 HS3ST3A1Q9Y663 406 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 USP3Q9Y6I4 520 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 K7ESF4 209 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 GABRA1P14867 456 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 SLC25A35Q3KQZ1 300 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 TMEM70Q9BUB7 260 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 MYOZ1Q9NP98 299 aaPredicted RBP8.33□□□□□ -1.08
VPS13A-203ENST00000360280 OR2W1Q9Y3N9 320 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 OR51B4Q9Y5P0 310 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 MEGF10Q96KG7 1140 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 NPTNQ9Y639 398 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 IGKV6-21A0A0C4DH24 114 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 LNP1A1A4G5 178 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 ORM2P19652 201 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 FUT7Q11130 342 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 GSG1Q2KHT4 349 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 PRR14Q9BWN1 585 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 RPEQ96AT9 228 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 RAB29O14966 203 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 WNT3P56703 355 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 TRAF4Q9BUZ4 470 aaPredicted RBP8.33□□□□□ -1.08
VPS13A-203ENST00000360280 SAP30LQ9HAJ7 183 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 DYNLT3P51808 116 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 SUMO3P55854 103 aaPredicted RBP8.33□□□□□ -1.08
VPS13A-203ENST00000360280 ACSM5Q6NUN0 579 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 LIAT1Q6ZQX7 453 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 TMEM204Q9BSN7 226 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 DNAL4O96015 105 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 LYZP61626 148 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 OR1F12Q8NHA8 337 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 DOCK11Q5JSL3 2073 aa8.33□□□□□ -1.08
VPS13A-203ENST00000360280 OR5AC1P0C628 307 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 UBE2V2Q15819 145 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 WFDC8Q8IUA0 241 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms