RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 OR13G1Q8NGZ3 307 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 C4orf45Q96LM5 186 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 ZNF154Q13106 437 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 PMS2P11Q13670 270 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 GGNBP1Q5YKI7 109 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 C16orf47Q6ZP98 133 aaPredicted RBP16.35■□□□□ 0.21
SHANK1-202ENST00000359082 ASPDHA6ND91 283 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 NKG7Q16617 165 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 IL21Q9HBE4 155 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 CTAG2O75638 210 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 PPP1CAP62136 330 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 FAM78BQ5VT40 261 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 TRAT1Q6PIZ9 186 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 DUSP18Q8NEJ0 188 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 OR10G4Q8NGN3 311 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 OR10G9Q8NGN4 311 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 OR10G7Q8NGN6 311 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 PRO1933Q9H354 126 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 NAA60Q9H7X0 242 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 FSCN3Q9NQT6 498 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 CTF1Q16619 201 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 COL13A1Q5TAT6 717 aaPredicted RBP16.34■□□□□ 0.21
SHANK1-202ENST00000359082 LILRB1Q8NHL6 650 aaPredicted RBP16.34■□□□□ 0.21
SHANK1-202ENST00000359082 RAB40CQ96S21 281 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 CXXC4Q9H2H0 198 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 CNTD2Q9H8S5 307 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 ZNF71Q9NQZ8 489 aaPredicted RBP16.34■□□□□ 0.21
SHANK1-202ENST00000359082 CLLU1Q5K131 121 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 CYSLTR2Q9NS75 346 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 A0A1W2PN81 502 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 SERGEFQ9UGK8 458 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 EXOGQ9Y2C4 368 aaKnown RBP16.34■□□□□ 0.21
SHANK1-202ENST00000359082 PGA3P0DJD8 388 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 CCKARP32238 428 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 AP5S1Q9NUS5 200 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 PRR13Q9NZ81 148 aa16.34■□□□□ 0.21
SHANK1-202ENST00000359082 HTN1P15515 57 aa16.33■□□□□ 0.21
SHANK1-202ENST00000359082 CAMPP49913 170 aa16.33■□□□□ 0.21
SHANK1-202ENST00000359082 SLC17A5Q9NRA2 495 aa16.33■□□□□ 0.21
SHANK1-202ENST00000359082 DYNLT3P51808 116 aa16.33■□□□□ 0.21
SHANK1-202ENST00000359082 LSM11P83369 360 aaKnown RBP eCLIP16.33■□□□□ 0.21
SHANK1-202ENST00000359082 HYAL1Q12794 435 aa16.33■□□□□ 0.21
SHANK1-202ENST00000359082 NHLRC1Q6VVB1 395 aa16.33■□□□□ 0.21
SHANK1-202ENST00000359082 ETV3LQ6ZN32 361 aa16.33■□□□□ 0.21
SHANK1-202ENST00000359082 WSB1Q9Y6I7 421 aa16.33■□□□□ 0.21
SHANK1-202ENST00000359082 OR3A1P47881 315 aa16.33■□□□□ 0.2
SHANK1-202ENST00000359082 PSMB2P49721 201 aa16.33■□□□□ 0.2
SHANK1-202ENST00000359082 OR4A4PQ8NGN8 299 aa16.33■□□□□ 0.2
SHANK1-202ENST00000359082 HLXQ14774 488 aaPredicted RBP16.33■□□□□ 0.2
SHANK1-202ENST00000359082 IL22RA2Q969J5 263 aa16.33■□□□□ 0.2
SHANK1-202ENST00000359082 CRYBB2P43320 205 aa16.33■□□□□ 0.2
SHANK1-202ENST00000359082 MMP24Q9Y5R2 645 aa16.33■□□□□ 0.2
SHANK1-202ENST00000359082 SPCS3P61009 180 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 SSPNQ14714 243 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 SPINK14Q6IE38 97 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 PECRQ9BY49 303 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 IL20Q9NYY1 176 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 PLPP3O14495 311 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 TMEM127O75204 238 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 NPY1RP25929 384 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 ACER2Q5QJU3 275 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 TMEM108Q6UXF1 575 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 OR2A5Q96R48 311 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 TMIGD3P0DMS9 266 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-202ENST00000359082 IL11RAQ14626 422 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 SIGIRRQ6IA17 410 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 ZNF683Q8IZ20 524 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 GVQW1Q8N7I0 195 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 LAMA4Q16363 1823 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 NKX2-2O95096 273 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 RPS4XP62701 263 aaKnown RBP16.32■□□□□ 0.2
SHANK1-202ENST00000359082 DHRS2Q13268 280 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 BHLHA15Q7RTS1 189 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-202ENST00000359082 WASHC3Q9Y3C0 194 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 CXCL10P02778 98 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 OR4A8P0C604 315 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 SMOC1Q9H4F8 434 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 GSX1Q9H4S2 264 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-202ENST00000359082 UBTD1Q9HAC8 227 aa16.32■□□□□ 0.2
SHANK1-202ENST00000359082 hADV38S2A0JD32 116 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 CIDEAO60543 219 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 CTSVO60911 334 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 ACTL6AO96019 429 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 CELA2BP08218 269 aaPredicted RBP16.31■□□□□ 0.2
SHANK1-202ENST00000359082 SNRPEP62304 92 aaKnown RBP16.31■□□□□ 0.2
SHANK1-202ENST00000359082 YBX1P67809 324 aaKnown RBP16.31■□□□□ 0.2
SHANK1-202ENST00000359082 C3AR1Q16581 482 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 CDKN2AP42771 156 aaKnown RBP16.31■□□□□ 0.2
SHANK1-202ENST00000359082 TMEM183BQ1AE95 376 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 FAM24BQ8N5W8 94 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 TMEFF2Q9UIK5 374 aaPredicted RBP16.31■□□□□ 0.2
SHANK1-202ENST00000359082 PLPP2O43688 288 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 CSN3P07498 182 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 DDX60LQ5H9U9 1706 aaKnown RBP16.31■□□□□ 0.2
SHANK1-202ENST00000359082 BCL3P20749 454 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 MPLP40238 635 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 FDX2Q6P4F2 183 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 OR8D4Q8NGM9 314 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 R4GN57 208 aa16.31■□□□□ 0.2
SHANK1-202ENST00000359082 M0R2Z0 102 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms