RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 TRBV6-7A0A0A0MS04 114 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 ZNF850A8MQ14 1090 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 HOXD4P09016 255 aaPredicted RBP13.7□□□□□ -0.22
PHTF1-201ENST00000357783 ADAMTS17Q8TE56 1095 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 LIME1Q9H400 295 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 EDARQ9UNE0 448 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 MSGN1A6NI15 193 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 IFNA2P01563 188 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 ZNF708P17019 499 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 CALHM1Q8IU99 346 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 PHYHIPLQ96FC7 376 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 C2orf50Q96LR7 162 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 BCO1Q9HAY6 547 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 TEX13DA0A0J9YY54 714 aaPredicted RBP13.7□□□□□ -0.22
PHTF1-201ENST00000357783 A0A1B0GW55 424 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 KRBOX1C9JBD0 128 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 DUX4L2P0CJ85 424 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 DUX4L3P0CJ86 424 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 DUX4L4P0CJ87 422 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 DUX4L5P0CJ88 424 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 DUX4L6P0CJ89 424 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 DUX4L7P0CJ90 424 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 RBMXP38159 391 aaKnown RBP13.7□□□□□ -0.22
PHTF1-201ENST00000357783 S100A10P60903 97 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 RAB32Q13637 225 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 POC1AQ8NBT0 407 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 TOMM40LQ969M1 308 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 PIK3IP1Q96FE7 263 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 LINC00470Q9BZP3 86 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 PRDM14Q9GZV8 571 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 PARPBPQ9NWS1 579 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 DUX4Q9UBX2 424 aa13.7□□□□□ -0.22
PHTF1-201ENST00000357783 C5orf49A4QMS7 147 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 ZNF503-AS2A6NEH8 195 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 TNFSF15O95150 251 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 DTYMKP23919 212 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 IL32P24001 234 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 PPIAP62937 165 aaKnown RBP13.69□□□□□ -0.22
PHTF1-201ENST00000357783 PAN3Q58A45 887 aaKnown RBP13.69□□□□□ -0.22
PHTF1-201ENST00000357783 NSUN5P2Q63ZY6 315 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 SLC25A26Q70HW3 274 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 STPG2Q8N412 459 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 OR56B2PQ8NGI1 322 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 SPSB4Q96A44 273 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 MARS2Q96GW9 593 aaKnown RBP13.69□□□□□ -0.22
PHTF1-201ENST00000357783 PAPOLGQ9BWT3 736 aaKnown RBP13.69□□□□□ -0.22
PHTF1-201ENST00000357783 MS4A7Q9GZW8 240 aaPredicted RBP13.69□□□□□ -0.22
PHTF1-201ENST00000357783 BARX1Q9HBU1 254 aaPredicted RBP13.69□□□□□ -0.22
PHTF1-201ENST00000357783 NECAP2Q9NVZ3 263 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 TSPAN4O14817 238 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 CTSDP07339 412 aaPredicted RBP13.69□□□□□ -0.22
PHTF1-201ENST00000357783 AIMP2Q13155 320 aaKnown RBP13.69□□□□□ -0.22
PHTF1-201ENST00000357783 NRN1LQ496H8 165 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 HES3Q5TGS1 186 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 PRSS54Q6PEW0 395 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 FOXRED2Q8IWF2 684 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 SGPP2Q8IWX5 399 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 ZNF611Q8N823 705 aa13.69□□□□□ -0.22
PHTF1-201ENST00000357783 ATP6V1G2-DDX39BF2Z307 99 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 CD79AP11912 226 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 ECI1P42126 302 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 MEOX1P50221 254 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 FXYD4P59646 89 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 SLC22A25Q6T423 547 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 BOLLQ8N9W6 283 aaKnown RBP13.68□□□□□ -0.22
PHTF1-201ENST00000357783 MRPS24Q96EL2 167 aaKnown RBP13.68□□□□□ -0.22
PHTF1-201ENST00000357783 LOXL4Q96JB6 756 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 C1orf123Q9NWV4 160 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 IL36GQ9NZH8 169 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 CRIM1Q9NZV1 1036 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 NPBWR2P48146 333 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 RBM11P57052 281 aaKnown RBP13.68□□□□□ -0.22
PHTF1-201ENST00000357783 RBM39Q14498 530 aaKnown RBP13.68□□□□□ -0.22
PHTF1-201ENST00000357783 PLEKHN1Q494U1 663 aaPredicted RBP13.68□□□□□ -0.22
PHTF1-201ENST00000357783 COLCA1Q6ZS62 124 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 EIF4E3Q8N5X7 224 aaKnown RBP13.68□□□□□ -0.22
PHTF1-201ENST00000357783 TAS2R3Q9NYW6 316 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 SHANK1Q9Y566 2161 aa13.68□□□□□ -0.22
PHTF1-201ENST00000357783 MALLQ13021 153 aa13.67□□□□□ -0.22
PHTF1-201ENST00000357783 ATP1A1-AS1Q5TC04 95 aa13.67□□□□□ -0.22
PHTF1-201ENST00000357783 APH1AQ96BI3 265 aa13.67□□□□□ -0.22
PHTF1-201ENST00000357783 CRYM-AS1A6NIL9 109 aa13.67□□□□□ -0.22
PHTF1-201ENST00000357783 F8VVB4 439 aa13.67□□□□□ -0.22
PHTF1-201ENST00000357783 F8VWA3 439 aa13.67□□□□□ -0.22
PHTF1-201ENST00000357783 PDCD6O75340 191 aa13.67□□□□□ -0.22
PHTF1-201ENST00000357783 OR7C1O76099 320 aaPredicted RBP13.67□□□□□ -0.22
PHTF1-201ENST00000357783 TPT1P13693 172 aaKnown RBP13.67□□□□□ -0.22
PHTF1-201ENST00000357783 PIGPP57054 158 aa13.67□□□□□ -0.22
PHTF1-201ENST00000357783 IAH1Q2TAA2 248 aaPredicted RBP13.67□□□□□ -0.22
PHTF1-201ENST00000357783 TECTBQ96PL2 329 aa13.67□□□□□ -0.22
PHTF1-201ENST00000357783 CYTL1Q9NRR1 136 aa13.67□□□□□ -0.22
PHTF1-201ENST00000357783 PCNX2A6NKB5 2137 aa13.66□□□□□ -0.22
PHTF1-201ENST00000357783 SP1P08047 785 aa13.66□□□□□ -0.22
PHTF1-201ENST00000357783 IL22RA1Q8N6P7 574 aa13.66□□□□□ -0.22
PHTF1-201ENST00000357783 STOML3Q8TAV4 291 aa13.66□□□□□ -0.22
PHTF1-201ENST00000357783 ZNF442Q9H7R0 627 aa13.66□□□□□ -0.22
PHTF1-201ENST00000357783 ASF1BQ9NVP2 202 aa13.66□□□□□ -0.22
PHTF1-201ENST00000357783 ATPIF1Q9UII2 106 aa13.66□□□□□ -0.22
PHTF1-201ENST00000357783 LIPGQ9Y5X9 500 aa13.66□□□□□ -0.22
PHTF1-201ENST00000357783 ARHGAP21Q5T5U3 1957 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms