RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 MAP1BP46821 2468 aaKnown RBP11.67□□□□□ -0.54
NCDN-201ENST00000356090 NSG1A0A0A6YYJ2 146 aa11.67□□□□□ -0.54
NCDN-201ENST00000356090 IFNA17P01571 189 aa11.67□□□□□ -0.54
NCDN-201ENST00000356090 FBP1P09467 338 aa11.67□□□□□ -0.54
NCDN-201ENST00000356090 SMIM6P0DI80 62 aa11.67□□□□□ -0.54
NCDN-201ENST00000356090 TAGLN2P37802 199 aaKnown RBP11.67□□□□□ -0.54
NCDN-201ENST00000356090 UBE2KP61086 200 aa11.67□□□□□ -0.54
NCDN-201ENST00000356090 S100A12P80511 92 aa11.67□□□□□ -0.54
NCDN-201ENST00000356090 C5orf24Q7Z6I8 188 aa11.67□□□□□ -0.54
NCDN-201ENST00000356090 ZNF441Q8N8Z8 693 aa11.67□□□□□ -0.54
NCDN-201ENST00000356090 OR1J1Q8NGS3 322 aa11.67□□□□□ -0.54
NCDN-201ENST00000356090 SPTSSAQ969W0 71 aa11.67□□□□□ -0.54
NCDN-201ENST00000356090 ZNF837Q96EG3 531 aaPredicted RBP11.67□□□□□ -0.54
NCDN-201ENST00000356090 ABHD14AQ9BUJ0 271 aa11.67□□□□□ -0.54
NCDN-201ENST00000356090 SLC2A9Q9NRM0 540 aa11.67□□□□□ -0.54
NCDN-201ENST00000356090 MYOTQ9UBF9 498 aa11.67□□□□□ -0.54
NCDN-201ENST00000356090 CTSDP07339 412 aaPredicted RBP11.66□□□□□ -0.54
NCDN-201ENST00000356090 AFF3P51826 1226 aaKnown RBP11.66□□□□□ -0.54
NCDN-201ENST00000356090 TLE1Q04724 770 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 C9orf135Q5VTT2 229 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 SLC25A47Q6Q0C1 308 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 WDSUB1Q8N9V3 476 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 OR6X1Q8NH79 312 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 ZNF501Q96CX3 271 aaPredicted RBP11.66□□□□□ -0.54
NCDN-201ENST00000356090 AKIRIN1Q9H9L7 192 aaPredicted RBP11.66□□□□□ -0.54
NCDN-201ENST00000356090 WNT16Q9UBV4 365 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 MASP2O00187 686 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 PIAS2O75928 621 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 HEXAP06865 529 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 ARL6IP1Q15041 203 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 HMGN3Q15651 99 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 ZNF695Q8IW36 515 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 D2HGDHQ8N465 521 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 C17orf78Q8N4C9 275 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 S100PBPQ96BU1 408 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 ALKBH3Q96Q83 286 aaPredicted RBP11.66□□□□□ -0.54
NCDN-201ENST00000356090 SYT3Q9BQG1 590 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 SLC35B3Q9H1N7 401 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 NELFAQ9H3P2 528 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 NAA60Q9H7X0 242 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 DKKL1Q9UK85 242 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 NOSIPQ9Y314 301 aaKnown RBP11.66□□□□□ -0.54
NCDN-201ENST00000356090 FER1L5A0AVI2 2057 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 LY86O95711 162 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 FOSL2P15408 326 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 ZNF84P51523 738 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 C4orf17Q53FE4 359 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 ACER2Q5QJU3 275 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 HIST2H3AQ71DI3 136 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 DTX1Q86Y01 620 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 HAS2Q92819 552 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 LIME1Q9H400 295 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 ST3GAL6Q9Y274 331 aa11.66□□□□□ -0.54
NCDN-201ENST00000356090 C5orf52A6NGY3 159 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 CRYM-AS1A6NIL9 109 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 CLN5O75503 358 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 B4GALT1P15291 398 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 DUSP1P28562 367 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 THBS4P35443 961 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 FAM3AP98173 230 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 PHYHD1Q5SRE7 291 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 ZNF774Q6NX45 483 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 ZNF343Q6P1L6 599 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 LGI3Q8N145 548 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 TIMM10BQ9Y5J6 103 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 F10P00742 488 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 HTR5AP47898 357 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 LBX1P52954 281 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 RUNX1Q01196 453 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 TSC22D1Q15714 1073 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 PLCXD3Q63HM9 321 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 MARS2Q96GW9 593 aaKnown RBP11.65□□□□□ -0.54
NCDN-201ENST00000356090 P4HTMQ9NXG6 502 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 FBLN5Q9UBX5 448 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 LIPGQ9Y5X9 500 aa11.65□□□□□ -0.54
NCDN-201ENST00000356090 DHHO43323 396 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 GDF9O60383 454 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 GPR137BO60478 399 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 SUMO3P55854 103 aaPredicted RBP11.64□□□□□ -0.55
NCDN-201ENST00000356090 RPS18P62269 152 aaKnown RBP11.64□□□□□ -0.55
NCDN-201ENST00000356090 TMEM123Q8N131 208 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 UBAC2Q8NBM4 344 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 PLPP5Q8NEB5 264 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 PP6455Q8WZ26 134 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 CHST5Q9GZS9 411 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 ZNF286AQ9HBT8 521 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 RARRES3Q9UL19 164 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 CCDC187A0A096LP49 1063 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 AP4M1O00189 453 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 EIF2S3P41091 472 aaKnown RBP11.64□□□□□ -0.55
NCDN-201ENST00000356090 ZNF133P52736 654 aaPredicted RBP11.64□□□□□ -0.55
NCDN-201ENST00000356090 SURF2Q15527 256 aaPredicted RBP11.64□□□□□ -0.55
NCDN-201ENST00000356090 SLC35G3Q8N808 338 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 SLC39A7Q92504 469 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 RASL10BQ96S79 203 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 TCEAL7Q9BRU2 100 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 PNRC2Q9NPJ4 139 aaKnown RBP11.64□□□□□ -0.55
NCDN-201ENST00000356090 CACNA1DQ01668 2161 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 ZNF724A8MTY0 619 aa11.64□□□□□ -0.55
NCDN-201ENST00000356090 GAPDHP04406 335 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms