RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 PRR18Q8N4B5 295 aa11.93□□□□□ -0.5
TRIM4-203ENST00000355947 UFSP2Q9NUQ7 469 aa11.93□□□□□ -0.5
TRIM4-203ENST00000355947 SPTY2D1-AS1A0A0U1RR47 76 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 ZNF814B7Z6K7 855 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 ALDH3B1P43353 468 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 HMGN3Q15651 99 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 UBE2V2Q15819 145 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 LURAP1LQ8IV03 231 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 Q8WTZ3 238 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 NIPSNAP3BQ9BS92 247 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 LRFN1Q9P244 771 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 ZNF107Q9UII5 783 aaPredicted RBP11.92□□□□□ -0.5
TRIM4-203ENST00000355947 GAB2Q9UQC2 676 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 LOC390937A0A1W2PQ73 354 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 FIGNL2A6NMB9 653 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 ATP6V0CP27449 155 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 RPS16P62249 146 aaKnown RBP11.92□□□□□ -0.5
TRIM4-203ENST00000355947 C9orf135Q5VTT2 229 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 ZNF695Q8IW36 515 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 DMBX1Q8NFW5 382 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 OR5C1Q8NGR4 320 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 GNRHR2Q96P88 292 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 CCNL2Q96S94 520 aaPredicted RBP11.92□□□□□ -0.5
TRIM4-203ENST00000355947 A0A087X0M5 115 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 A0A1B0GX30 115 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 C3orf80F5H4A9 247 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 IGHV3-9P01782 118 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 BLKP51451 505 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 NAT6Q93015 286 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 PTX4Q96A99 478 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 WSB1Q9Y6I7 421 aa11.92□□□□□ -0.5
TRIM4-203ENST00000355947 IGHV3-64DA0A0J9YX35 117 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 NKX2-6A6NCS4 301 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 RBFOX3A6NFN3 312 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 ZNF587BE7ETH6 402 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 CYTIPO60759 359 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 SRSF10O75494 262 aaKnown RBP11.91□□□□□ -0.5
TRIM4-203ENST00000355947 NDUFB7P17568 137 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 BMP5P22003 454 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 HSD11B2P80365 405 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 SSX2Q16385 188 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 MPV17LQ2QL34 196 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 WDR25Q64LD2 544 aaPredicted RBP11.91□□□□□ -0.5
TRIM4-203ENST00000355947 PLPP5Q8NEB5 264 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 OR1L3Q8NH93 324 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 SOX15O60248 233 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 SLC34A2O95436 690 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 RND3P61587 244 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 YPEL5P62699 121 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 FBXL14Q8N1E6 418 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 LIME1Q9H400 295 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 RBM7Q9Y580 266 aaKnown RBP11.91□□□□□ -0.5
TRIM4-203ENST00000355947 HS3ST3B1Q9Y662 390 aa11.91□□□□□ -0.5
TRIM4-203ENST00000355947 BTBD17A6NE02 478 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 HSD17B6O14756 317 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 TSPAN2O60636 221 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 DANCRP0C864 163 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 ERVFRD-1P60508 538 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 RNF4P78317 190 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 DLX2Q07687 328 aaPredicted RBP11.9□□□□□ -0.5
TRIM4-203ENST00000355947 CXorf66Q5JRM2 361 aaPredicted RBP11.9□□□□□ -0.5
TRIM4-203ENST00000355947 LGI3Q8N145 548 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 OR10G3Q8NGC4 313 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 PIGCQ92535 297 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 SLC2A9Q9NRM0 540 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 P4HTMQ9NXG6 502 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 ANXA10Q9UJ72 324 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 SOD3P08294 240 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 RPS2P15880 293 aaKnown RBP11.9□□□□□ -0.5
TRIM4-203ENST00000355947 PLA2G5P39877 138 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 ELLP55199 621 aaPredicted RBP11.9□□□□□ -0.5
TRIM4-203ENST00000355947 ZNF154Q13106 437 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 C21orf62-AS1Q17RA5 79 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 KHDC3LQ587J8 217 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 DOK3Q7L591 496 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 THNSL2Q86YJ6 484 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 SLC35G3Q8N808 338 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 OR14L1PQ8NHC6 308 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 ATG101Q9BSB4 218 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 RNF122Q9H9V4 155 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 PLEKHA2Q9HB19 425 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 CD207Q9UJ71 328 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 DNAJC13O75165 2243 aa11.9□□□□□ -0.5
TRIM4-203ENST00000355947 NUP210LQ5VU65 1888 aa11.9□□□□□ -0.51
TRIM4-203ENST00000355947 CCDC187A0A096LP49 1063 aa11.9□□□□□ -0.51
TRIM4-203ENST00000355947 IGHV4-34P06331 123 aa11.9□□□□□ -0.51
TRIM4-203ENST00000355947 MMP7P09237 267 aaPredicted RBP11.9□□□□□ -0.51
TRIM4-203ENST00000355947 PGA4P0DJD7 388 aa11.9□□□□□ -0.51
TRIM4-203ENST00000355947 PGA5P0DJD9 388 aa11.9□□□□□ -0.51
TRIM4-203ENST00000355947 TNFRSF4P43489 277 aa11.9□□□□□ -0.51
TRIM4-203ENST00000355947 NKX2-1P43699 371 aaPredicted RBP11.9□□□□□ -0.51
TRIM4-203ENST00000355947 CSNK1EP49674 416 aaKnown RBP11.9□□□□□ -0.51
TRIM4-203ENST00000355947 IGLV3-21P80748 117 aaPredicted RBP11.9□□□□□ -0.51
TRIM4-203ENST00000355947 FAM3AP98173 230 aa11.9□□□□□ -0.51
TRIM4-203ENST00000355947 EWSR1Q01844 656 aaKnown RBP eCLIP11.9□□□□□ -0.51
TRIM4-203ENST00000355947 RAET1LQ5VY80 246 aa11.9□□□□□ -0.51
TRIM4-203ENST00000355947 CMTM1Q8IZ96 169 aa11.9□□□□□ -0.51
TRIM4-203ENST00000355947 OR1N1Q8NGS0 311 aa11.9□□□□□ -0.51
TRIM4-203ENST00000355947 OR51H1Q8NH63 302 aa11.9□□□□□ -0.51
TRIM4-203ENST00000355947 SHDQ96IW2 340 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms