RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 FAM25GB3EWG6 89 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 F5H5K5 113 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 SULT1C2O00338 296 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 LDLRAD4O15165 306 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 TPD52L2O43399 206 aaKnown RBP5.92□□□□□ -1.46
VPS13A-201ENST00000355766 XRCC3O43542 346 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 LMX1BO60663 402 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 HPGDSO60760 199 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 NCR1O76036 304 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 IGHV4-31P0DP07 118 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 VSIG10L2P0DP72 767 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 SLC2A2P11168 524 aaPredicted RBP5.92□□□□□ -1.46
VPS13A-201ENST00000355766 ARSBP15848 533 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 HNF1AP20823 631 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 PRKXP51817 358 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 CAV3P56539 151 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 GALK2Q01415 458 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 COL10A1Q03692 680 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 RIPPLY1Q0D2K3 151 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 FAPQ12884 760 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 MALLQ13021 153 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 IL18Q14116 193 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 TBRG1Q3YBR2 411 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 TRIQKQ629K1 86 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF774Q6NX45 483 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 DCDC5Q6ZRR9 648 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 COMMD2Q86X83 199 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 RDH10Q8IZV5 341 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 UBE2J2Q8N2K1 259 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 Q8N402 240 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF433Q8N7K0 673 aaPredicted RBP5.92□□□□□ -1.46
VPS13A-201ENST00000355766 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.92□□□□□ -1.46
VPS13A-201ENST00000355766 PNLDC1Q8NA58 520 aaKnown RBP5.92□□□□□ -1.46
VPS13A-201ENST00000355766 CSNK2A3Q8NEV1 391 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 SEMA6DQ8NFY4 1073 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 OR5L1Q8NGL2 311 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 LILRB1Q8NHL6 650 aaPredicted RBP5.92□□□□□ -1.46
VPS13A-201ENST00000355766 SGMS2Q8NHU3 365 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 TRIM63Q969Q1 353 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 FAM3DQ96BQ1 224 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 SLC25A38Q96DW6 304 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 SDHCQ99643 169 aaPredicted RBP5.92□□□□□ -1.46
VPS13A-201ENST00000355766 CST11Q9H112 138 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 SCPEP1Q9HB40 452 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 DIABLOQ9NR28 239 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 COPZ2Q9P299 210 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 OR5V1Q9UGF6 321 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 KCNS2Q9ULS6 477 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 PROCRQ9UNN8 238 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 AMDHD2Q9Y303 409 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 RNF115Q9Y4L5 304 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 TGP01266 2768 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF816-ZNF321PA0A0X1KG74 233 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 A0A1W2PPK0 400 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 METTL21EPA6NDL7 271 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 H3BUI4 141 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 GABARAPH6UMI1 98 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 TCF21O43680 179 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 SSX4O60224 188 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF780AO75290 641 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-201ENST00000355766 ECDO95905 644 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-201ENST00000355766 CST4P01036 141 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 IGKV3-15P01624 115 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 MAS1P04201 325 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 EIF4EP06730 217 aaKnown RBP5.91□□□□□ -1.46
VPS13A-201ENST00000355766 SLC25A16P16260 332 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 PSMB1P20618 241 aaKnown RBP5.91□□□□□ -1.46
VPS13A-201ENST00000355766 STOMP27105 288 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 APLNRP35414 380 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF93P35789 620 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-201ENST00000355766 POU3F4P49335 361 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 UBE2NP61088 152 aaKnown RBP5.91□□□□□ -1.46
VPS13A-201ENST00000355766 RAB1AP62820 205 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 DYRK1AQ13627 763 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 GPR176Q14439 515 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 TBC1D28Q2M2D7 210 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF672Q499Z4 452 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-201ENST00000355766 PYDC2Q56P42 97 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 TMEM69Q5SWH9 247 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 CLVS2Q5SYC1 327 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 GLYATL3Q5SZD4 288 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 FAM120AOSQ5T036 256 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 CYB5R2Q6BCY4 276 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 CLEC2AQ6UVW9 174 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 LHFPL2Q6ZUX7 228 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF610Q8N9Z0 462 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 C19orf18Q8NEA5 215 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 OR4M1Q8NGD0 313 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 KCNG3Q8TAE7 436 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 SLC25A28Q96A46 364 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 RFT1Q96AA3 541 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 PHF21AQ96BD5 680 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 FGGYQ96C11 551 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 MRPS24Q96EL2 167 aaKnown RBP5.91□□□□□ -1.46
VPS13A-201ENST00000355766 ADAT3Q96EY9 351 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-201ENST00000355766 REEP6Q96HR9 211 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 POM121L2Q96KW2 1035 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 TRAF4Q9BUZ4 470 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-201ENST00000355766 ACTR6Q9GZN1 396 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 SLC22A4Q9H015 551 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms