RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 SLC25A46Q96AG3 418 aa8.91□□□□□ -0.98
COL11A1-201ENST00000353414 APOBEC3DQ96AK3 386 aaPredicted RBP8.91□□□□□ -0.98
COL11A1-201ENST00000353414 IGHV3-72A0A0B4J1Y9 119 aa8.91□□□□□ -0.98
COL11A1-201ENST00000353414 AVPR2P30518 371 aa8.91□□□□□ -0.98
COL11A1-201ENST00000353414 GALR1P47211 349 aa8.91□□□□□ -0.98
COL11A1-201ENST00000353414 CCR9P51686 369 aa8.91□□□□□ -0.98
COL11A1-201ENST00000353414 RHOXF1Q8NHV9 184 aa8.91□□□□□ -0.98
COL11A1-201ENST00000353414 KNL1Q8NG31 2342 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 TRDV1A0A1B0GX56 115 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 BCL3P20749 454 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 ACAA2P42765 397 aaKnown RBP8.9□□□□□ -0.98
COL11A1-201ENST00000353414 OR3A1P47881 315 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 ERVS71-1P61550 626 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 EGR3Q06889 387 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 COTL1Q14019 142 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 EDARADDQ8WWZ3 215 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 WDR61Q9GZS3 305 aaKnown RBP8.9□□□□□ -0.98
COL11A1-201ENST00000353414 SIRT5Q9NXA8 310 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 TEX50A0A1B0GTY4 177 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 MRPS14O60783 128 aaKnown RBP8.9□□□□□ -0.98
COL11A1-201ENST00000353414 GFRA1P56159 465 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 TPBGQ13641 420 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 TMEM211Q6ICI0 200 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 GPX8Q8TED1 209 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 TMEM18Q96B42 140 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 SAP30LQ9HAJ7 183 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 TCFL5Q9UL49 500 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 AMMECR1Q9Y4X0 333 aaPredicted RBP8.9□□□□□ -0.98
COL11A1-201ENST00000353414 PAPPA2Q9BXP8 1791 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 CKAP5Q14008 2032 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 KIAA1217Q5T5P2 1943 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 LMO7DNF2Z398 122 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 VAMP5O95183 116 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 COL9A1P20849 921 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 ACP1P24666 158 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 GRAMD2BQ96HH9 432 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 B9D1Q9UPM9 204 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 E5RGE8 158 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 PRSS1P07477 247 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 GNG4P50150 75 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 SSPNQ14714 243 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 TSPO2Q5TGU0 170 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 TBC1D26Q86UD7 250 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 TMEM116Q8NCL8 245 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 DYRK2Q92630 601 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 NAT8BQ9UHF3 227 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 NSG2Q9Y328 171 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 ICE1Q9Y2F5 2266 aa8.9□□□□□ -0.98
COL11A1-201ENST00000353414 PLAUP00749 431 aa8.9□□□□□ -0.99
COL11A1-201ENST00000353414 PSMB6P28072 239 aa8.9□□□□□ -0.99
COL11A1-201ENST00000353414 RPL30P62888 115 aaKnown RBP8.9□□□□□ -0.99
COL11A1-201ENST00000353414 DHODHQ02127 395 aa8.9□□□□□ -0.99
COL11A1-201ENST00000353414 ST8SIA1Q92185 356 aa8.9□□□□□ -0.99
COL11A1-201ENST00000353414 KCTD12Q96CX2 325 aaKnown RBP8.9□□□□□ -0.99
COL11A1-201ENST00000353414 SLC25A21Q9BQT8 299 aaPredicted RBP8.9□□□□□ -0.99
COL11A1-201ENST00000353414 TRIM77I1YAP6 450 aa8.9□□□□□ -0.99
COL11A1-201ENST00000353414 PPOXP50336 477 aa8.9□□□□□ -0.99
COL11A1-201ENST00000353414 GNG3P63215 75 aa8.9□□□□□ -0.99
COL11A1-201ENST00000353414 TRAT1Q6PIZ9 186 aa8.9□□□□□ -0.99
COL11A1-201ENST00000353414 ELOVL1Q9BW60 279 aa8.9□□□□□ -0.99
COL11A1-201ENST00000353414 PIGMQ9H3S5 423 aa8.9□□□□□ -0.99
COL11A1-201ENST00000353414 POMT2Q9UKY4 750 aa8.9□□□□□ -0.99
COL11A1-201ENST00000353414 HIST1H3AP68431 136 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 PMS2P11Q13670 270 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 CD276Q5ZPR3 534 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 FUNDC1Q8IVP5 155 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 ASB13Q8WXK3 278 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 RAB1CQ92928 201 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 PARP11Q9NR21 331 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 A0A1W2PRX2 142 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 PNLIPP16233 465 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 ZNF137PP52743 207 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 LOXL3P58215 753 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 OR10D4PQ8NGN7 298 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 PPP1R1CQ8WVI7 109 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 LPAR5Q9H1C0 372 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 CMC2Q9NRP2 79 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 MASP2O00187 686 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 GNG7O60262 68 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 ACSM4P0C7M7 580 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 GPR3P46089 330 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 CD81P60033 236 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 ZNF117Q03924 483 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 SLC16A12Q6ZSM3 486 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 OR13G1Q8NGZ3 307 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 GPNMBQ14956 572 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 EMC4Q5J8M3 183 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 LYSMD2Q8IV50 215 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 APOBEC4Q8WW27 367 aaKnown RBP8.89□□□□□ -0.99
COL11A1-201ENST00000353414 SSMEM1Q8WWF3 244 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 FOXC2Q99958 501 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 C19orf43Q9BQ61 176 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 JTBO76095 146 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 HLA-GP17693 338 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 GZMKP49863 264 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 SOSTQ9BQB4 213 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 RHNO1Q9BSD3 238 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 SLC25A30Q5SVS4 291 aa8.89□□□□□ -0.99
COL11A1-201ENST00000353414 WDR89Q96FK6 387 aaPredicted RBP8.89□□□□□ -0.99
COL11A1-201ENST00000353414 PCED1AQ9H1Q7 454 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms