RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 LIAT1Q6ZQX7 453 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 LYZL2Q7Z4W2 148 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 TMEM156Q8N614 296 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 DYRK2Q92630 601 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 IFT22Q9H7X7 185 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 WDR54Q9H977 334 aa21.31■■□□□ 1
CPNE1-202ENST00000352393 NXT1Q9UKK6 140 aaKnown RBP21.31■■□□□ 1
CPNE1-202ENST00000352393 BORCS7-ASMTA0A0B4J1R7 106 aa21.3■■□□□ 1
CPNE1-202ENST00000352393 NME2P1O60361 137 aa21.3■■□□□ 1
CPNE1-202ENST00000352393 PTAFRP25105 342 aa21.3■■□□□ 1
CPNE1-202ENST00000352393 TSPO2Q5TGU0 170 aa21.3■■□□□ 1
CPNE1-202ENST00000352393 GPR157Q5UAW9 335 aa21.3■■□□□ 1
CPNE1-202ENST00000352393 HPSE2Q8WWQ2 592 aa21.3■■□□□ 1
CPNE1-202ENST00000352393 USB1Q9BQ65 265 aaKnown RBP21.3■■□□□ 1
CPNE1-202ENST00000352393 SLC2A9Q9NRM0 540 aa21.3■■□□□ 1
CPNE1-202ENST00000352393 A0A0J9YW62 118 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 DIRAS3O95661 229 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 HOXB1P14653 301 aaPredicted RBP21.29■■□□□ 1
CPNE1-202ENST00000352393 GPR137CQ8N3F9 429 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 SPEM1Q8N4L4 309 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 OR10AD1Q8NGE0 317 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 MSI2Q96DH6 328 aaKnown RBP21.29■■□□□ 1
CPNE1-202ENST00000352393 SRXN1Q9BYN0 137 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 DKKL1Q9UK85 242 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 IGHV1-45A0A0A0MS14 117 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 XRCC2O43543 280 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 LMO1P25800 156 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 FXYD4P59646 89 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 S100A12P80511 92 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 GUK1Q16774 197 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 TMEM42Q69YG0 159 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 LHFPL2Q6ZUX7 228 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 DUSP23Q9BVJ7 150 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 OCIAD1Q9NX40 245 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 LUZP4Q9P127 313 aa21.29■■□□□ 1
CPNE1-202ENST00000352393 IGKV1-12A0A0C4DH73 117 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 IGKV1D-12P01611 117 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 AKR1C3P42330 323 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 RBP2P50120 134 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 PIGYQ3MUY2 71 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 PHLDA2Q53GA4 152 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 AKIRIN2Q53H80 203 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 AWAT1Q58HT5 328 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 ZNF774Q6NX45 483 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 SLC22A25Q6T423 547 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 SH2D2AQ9NP31 389 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 RPS10P5Q9NQ39 176 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 CCDC187A0A096LP49 1063 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 TNFSF11O14788 317 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 GEMIN2O14893 280 aaKnown RBP21.28■■□□□ 1
CPNE1-202ENST00000352393 DUSP1P28562 367 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 ZNF616Q08AN1 781 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 IL13RA2Q14627 380 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 KRTAP27-1Q3LI81 207 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 OR1F12Q8NHA8 337 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 MOB3AQ96BX8 217 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 BORCS8Q96FH0 119 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 IMMP1LQ96LU5 166 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 PRUNE2Q8WUY3 3088 aa21.28■■□□□ 1
CPNE1-202ENST00000352393 G3V3Y1 287 aa21.27■■□□□ 1
CPNE1-202ENST00000352393 EIF3GO75821 320 aaKnown RBP eCLIP21.27■■□□□ 1
CPNE1-202ENST00000352393 CST2P09228 141 aa21.27■■□□□ 1
CPNE1-202ENST00000352393 RNF212Q495C1 297 aa21.27■■□□□ 1
CPNE1-202ENST00000352393 OR52M1Q8NGK5 317 aa21.27■■□□□ 1
CPNE1-202ENST00000352393 OR5L1Q8NGL2 311 aa21.27■■□□□ 1
CPNE1-202ENST00000352393 C19orf12Q9NSK7 152 aa21.27■■□□□ 1
CPNE1-202ENST00000352393 IL36GQ9NZH8 169 aa21.27■■□□□ 1
CPNE1-202ENST00000352393 OR6C6A6NF89 314 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 CAMLGP49069 296 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 UCP3P55916 312 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 PRSS12P56730 875 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 RAC1P63000 192 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 LGI3Q8N145 548 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 BCO1Q9HAY6 547 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 STRAPQ9Y3F4 350 aaKnown RBP21.26■□□□□ 0.99
CPNE1-202ENST00000352393 C1orf196B1AJZ1 125 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 UMODP07911 640 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 ACAA1P09110 424 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-202ENST00000352393 COX6A1P12074 109 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 FHITP49789 147 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 STARD6P59095 220 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 OSR2Q8N2R0 312 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 SF3B5Q9BWJ5 86 aaKnown RBP21.26■□□□□ 0.99
CPNE1-202ENST00000352393 ZNF700Q9H0M5 742 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 SH3BGRL3Q9H299 93 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 TUBA4BQ9H853 241 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 ZNF286AQ9HBT8 521 aa21.26■□□□□ 0.99
CPNE1-202ENST00000352393 C7orf77A4D0Y5 90 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 FAM221AA4D161 298 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 LCATP04180 440 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 RAB5CP51148 216 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 SNRPEP62304 92 aaKnown RBP21.25■□□□□ 0.99
CPNE1-202ENST00000352393 BRICD5Q6PL45 260 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 FBXW12Q6X9E4 464 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 Q6ZPA2 131 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 FBXL14Q8N1E6 418 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 OR11L1Q8NGX0 322 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 JSRP1Q96MG2 331 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-202ENST00000352393 RGCCQ9H4X1 137 aa21.25■□□□□ 0.99
CPNE1-202ENST00000352393 TMEM38BQ9NVV0 291 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms