RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 CFHR1Q03591 330 aa16.33■□□□□ 0.2
SCARF1-202ENST00000348987 FOXO1Q12778 655 aa16.33■□□□□ 0.2
SCARF1-202ENST00000348987 HLA-DQA1Q5Y7H0 255 aa16.33■□□□□ 0.2
SCARF1-202ENST00000348987 ZNF664Q8N3J9 261 aa16.33■□□□□ 0.2
SCARF1-202ENST00000348987 OR5R1Q8NH85 324 aa16.33■□□□□ 0.2
SCARF1-202ENST00000348987 SNX22Q96L94 193 aa16.33■□□□□ 0.2
SCARF1-202ENST00000348987 GPER1Q99527 375 aa16.33■□□□□ 0.2
SCARF1-202ENST00000348987 SMDT1Q9H4I9 107 aa16.33■□□□□ 0.2
SCARF1-202ENST00000348987 ZNF701Q9NV72 531 aaPredicted RBP16.33■□□□□ 0.2
SCARF1-202ENST00000348987 C9J4A7 227 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 DXOO77932 396 aaKnown RBP16.32■□□□□ 0.2
SCARF1-202ENST00000348987 HCKP08631 526 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 GLI4P10075 376 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 GLIPR1P48060 266 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 RAB4BP61018 213 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 C5orf24Q7Z6I8 188 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 OR5AS1Q8N127 324 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 OR51T1Q8NGJ9 327 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 OR13D1Q8NGV5 346 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 RNF133Q8WVZ7 376 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 MMACHCQ9Y4U1 282 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 PLPP3O14495 311 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 FOLR1P15328 257 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 PGCP20142 388 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 G0S2P27469 103 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 CD38P28907 300 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 TMEM176BQ3YBM2 270 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-202ENST00000348987 SPSB3Q6PJ21 355 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 KLHL24Q6TFL4 600 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 TDHQ8IZJ6 230 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 OR5D18Q8NGL1 313 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 SLAMF6Q96DU3 332 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 TVP23CQ96ET8 276 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 FOXD3Q9UJU5 478 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-202ENST00000348987 CYTIPO60759 359 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 PGA4P0DJD7 388 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 PGA5P0DJD9 388 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 CDCP2Q5VXM1 449 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 TCEAL6Q6IPX3 200 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 DEGS2Q6QHC5 323 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 THAP3Q8WTV1 239 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-202ENST00000348987 FAM210BQ96KR6 192 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 C5orf34Q96MH7 638 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 OR10A2Q9H208 303 aa16.32■□□□□ 0.2
SCARF1-202ENST00000348987 A0A1W2PR77 199 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 CRYM-AS1A6NIL9 109 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 MT-ATP6P00846 226 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 LYZL2Q7Z4W2 148 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 NIPSNAP3BQ9BS92 247 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 URM1Q9BTM9 101 aaKnown RBP16.31■□□□□ 0.2
SCARF1-202ENST00000348987 VN1R1Q9GZP7 353 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 SIRT7Q9NRC8 400 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 NSG1A0A0A6YYJ2 146 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 GZMBP10144 247 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 BLVRBP30043 206 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-202ENST00000348987 CEACAM6P40199 344 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 GPR157Q5UAW9 335 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 SLC22A25Q6T423 547 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 NAXEQ8NCW5 288 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 OR52M1Q8NGK5 317 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 OR2G3Q8NGZ4 309 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 SHDQ96IW2 340 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 ZNF700Q9H0M5 742 aa16.31■□□□□ 0.2
SCARF1-202ENST00000348987 RTTNQ86VV8 2226 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 FTCDNL1E5RQL4 147 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 ZNF205O95201 554 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 HPNP05981 417 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 APLNRP35414 380 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 RNF4P78317 190 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 C17orf82Q86X59 251 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-202ENST00000348987 NDUFAF3Q9BU61 184 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 FREM2Q5SZK8 3169 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 ASCC3Q8N3C0 2202 aaKnown RBP16.3■□□□□ 0.2
SCARF1-202ENST00000348987 DHRS7CA6NNS2 312 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 EREGO14944 169 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 SFTPCP11686 197 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 MDKP21741 143 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-202ENST00000348987 ANOS1P23352 680 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 POLR2HP52434 150 aaKnown RBP16.3■□□□□ 0.2
SCARF1-202ENST00000348987 RELQ04864 619 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-202ENST00000348987 JOSD1Q15040 202 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-202ENST00000348987 SYT13Q7L8C5 426 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 ABHD12BQ7Z5M8 362 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-202ENST00000348987 FAM86C1Q9NVL1 165 aa16.3■□□□□ 0.2
SCARF1-202ENST00000348987 CCDC85CA6NKD9 419 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 GEMIN2O14893 280 aaKnown RBP16.29■□□□□ 0.2
SCARF1-202ENST00000348987 FGF7P21781 194 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 TSPO2Q5TGU0 170 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 C1QL2Q7Z5L3 287 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 OR10S1Q8NGN2 331 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 OR1N1Q8NGS0 311 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 MED29Q9NX70 200 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 PADI1Q9ULC6 663 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 WSB1Q9Y6I7 421 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 SHISA8B8ZZ34 492 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 CTSDP07339 412 aaPredicted RBP16.29■□□□□ 0.2
SCARF1-202ENST00000348987 OR5AC1P0C628 307 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 PIGPP57054 158 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 ICAM4Q14773 271 aa16.29■□□□□ 0.2
SCARF1-202ENST00000348987 OIT3Q8WWZ8 545 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms